Concepedia

Gene Tree Inference

Gene Tree Inference is the computational and statistical process of reconstructing the evolutionary relationships among homologous gene sequences from their molecular variation, distinguishing itself from species tree inference by focusing on the phylogenetic history of individual genes, including events such as duplication, loss, and incomplete lineage sorting.

1.2K

Publications

229.1K

Citations

3.3K

Authors

1.2K

Institutions

Publications per year

2017–2026

311

Parents

Children

Publications

1.2K

MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets

Sudhir Kumar, Glen Stecher, Koichiro Tamura · Molecular Biology and Evolution · 2016 · 45.6K citations · Full text

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MrBayes 3.2: Efficient Bayesian Phylogenetic Inference and Model Choice Across a Large Model Space

Fredrik Ronquist, Maxim Teslenko, Paul van der Mark et al. · Systematic Biology · 2012 · 28K citations · Full text

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OrthoFinder: phylogenetic orthology inference for comparative genomics

David Emms, Steven Kelly · Genome biology · 2019 · 8K citations · Full text

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MEGA2: molecular evolutionary genetics analysis software

Sudhir Kumar, Koichiro Tamura, Ingrid B. Jakobsen et al. · Bioinformatics · 2001 · 6.1K citations · Full text

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Prospects for inferring very large phylogenies by using the neighbor-joining method

Koichiro Tamura, Masatoshi Nei, Sudhir Kumar · Proceedings of the National Academy of Sciences · 2004 · 5.6K citations · Full text

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1–5 of 1.2K

Authors

3.3K

  1. TW
    Tandy Warnow

    The University of Texas at Austin, United States

    28 publications · 5.3K citations

    25

    h-index

  2. SM
    Siavash Mirarab

    University of California San Diego, United States

    27 publications · 8.8K citations

    24

    h-index

  3. ZY
    Ziheng Yang

    University College London, United Kingdom

    21 publications · 6.1K citations

    20

    h-index

  4. MS
    Mukul S. Bansal

    University of Connecticut, United States

    21 publications · 1.4K citations

    18

    h-index

  5. LN
    Luay Nakhleh

    Rice University, United States

    23 publications · 2.4K citations

    18

    h-index

1–5 of 3.3K

Institutions

1.2K

  1. Centre National de la Recherche Scientifique

    Paris, France

    37 h-index

    167 publications

    14.6K citations

  2. University of California, Berkeley

    Berkeley, United States

    33 h-index

    65 publications

    44K citations

  3. Chinese Academy of Sciences

    Beijing, China

    30 h-index

    119 publications

    14.2K citations

  4. Harvard University

    Cambridge, United States

    30 h-index

    63 publications

    10.9K citations

  5. University of Michigan

    Ann Arbor, United States

    29 h-index

    75 publications

    12.4K citations

  6. University College London

    London, United Kingdom

    24 h-index

    56 publications

    10.1K citations

  7. University of California, Davis

    Davis, United States

    23 h-index

    43 publications

    36.7K citations

  8. University of Washington

    Seattle, United States

    21 h-index

    40 publications

    5.8K citations

1–8 of 1.2K

Venues

  1. Systematic Biology

    143 publications · 52K citations

    82

    h-index

  2. Molecular Biology and Evolution

    MBE · 83 publications · 61.6K citations

    53

    h-index

  3. Molecular Phylogenetics and Evolution

    101 publications · 8.4K citations

    50

    h-index

  4. Bioinformatics

    60 publications · 18.2K citations

    37

    h-index

  5. Evolution

    30 publications · 4.7K citations

    26

    h-index

1–5