Concepedia

Gene Entity Recognition

Gene Entity Recognition is a natural language processing task that identifies and classifies gene mentions in scientific text, distinguishing them from other biological entities by their specific nomenclature and contextual usage.

37

Publications

2.9K

Citations

174

Authors

72

Institutions

Publications per year

2017–2026

5

Variants

Gene Named Entity RecognitionGene Ner

Parents

Publications

37

Overview of BioCreative II gene mention recognition

Larry Smith, Lorraine Tanabe, Cheng-Ju Kuo et al. · Genome biology · 2008 · 490 citations · Full text

, , +14

ABNER: an open source tool for automatically tagging genes, proteins and other entity names in text

Burr Settles · Computer applications in the biosciences · 2005 · 468 citations · Full text

, , +15

ProMiner: rule-based protein and gene entity recognition

Daniel Hanisch, Katrin Fundel, Heinz‐Theodor Mevissen et al. · BMC Bioinformatics · 2005 · 347 citations · Full text

, , +17

BioCreAtIvE Task 1A: gene mention finding evaluation

Alexander Yeh, Alexander A. Morgan, Marc Colosimo et al. · BMC Bioinformatics · 2005 · 210 citations · Full text

, , +14

Gene name ambiguity of eukaryotic nomenclatures

Hongfang Liu, Carol Friedman · Bioinformatics · 2004 · 146 citations · Full text

, , +17

1–5 of 37

Authors

174

  1. AV
    Alfonso Valencia

    Spanish National Cancer Research Centre, Spain

    4 publications · 189 citations

    4

    h-index

  2. AV
    Andreas Vlachos

    University of Cambridge, United Kingdom

    3 publications · 546 citations

    3

    h-index

  3. CB
    Christian Blaschke

    Centro Nacional de Biotecnología, Spain

    3 publications · 643 citations

    3

    h-index

  4. RT
    Richard Tzong‐Han Tsai

    Institute of Information Science, Academia Sinica, Taiwan

    3 publications · 521 citations

    3

    h-index

  5. IC
    I‐Fang Chung

    National Yang Ming Chiao Tung University, Taiwan

    2 publications · 523 citations

    2

    h-index

1–5 of 174

Institutions

72

  1. Fraunhofer Institute for Algorithms and Scientific Computing

    Sankt Augustin, Germany

    3 h-index

    7 publications

    2.1K citations

  2. The University of Tokyo

    Tokyo, Japan

    3 h-index

    8 publications

    287 citations

  3. Institute of Information Science, Academia Sinica

    Taipei, Taiwan

    3 h-index

    10 publications

    2.1K citations

  4. University of Cambridge

    Cambridge, United Kingdom

    3 h-index

    5 publications

    602 citations

  5. Universidad Autónoma de Madrid

    Madrid, Spain

    2 h-index

    4 publications

    306 citations

  6. University of Illinois Urbana-Champaign

    Urbana, United States

    2 h-index

    10 publications

    180 citations

  7. Dalian University of Technology

    Dalian, China

    2 h-index

    8 publications

    268 citations

  8. Dalian University

    Dalian, China

    2 h-index

    4 publications

    164 citations

1–8 of 72

Venues

  1. BMC Bioinformatics

    6 publications · 683 citations

    6

    h-index

  2. Bioinformatics

    4 publications · 438 citations

    4

    h-index

  3. Database

    2 publications · 36 citations

    2

    h-index

  4. Journal of Biomedical Informatics

    2 publications · 59 citations

    2

    h-index

  5. 1

    h-index

1–5