Concepedia

Energy Function Optimization

Energy Function Optimization is a computational method in structural biology that, within the context of side-chain packing, minimizes an energy function to identify the most thermodynamically stable conformation of amino acid side chains by systematically evaluating and optimizing their rotameric states.

551

Publications

45.8K

Citations

1.6K

Authors

582

Institutions

Publications per year

2017–2026

114

Parents

Publications

551

Fast approximate energy minimization via graph cuts

Yuri Boykov, Olga Veksler, Ramin Zabih · IEEE Transactions on Pattern Analysis and Machine Intelligence · 2001 · 7K citations

, , +7

What energy functions can be minimized via graph cuts?

Vladimir Kolmogorov, Ramin Zabih · IEEE Transactions on Pattern Analysis and Machine Intelligence · 2004 · 3.1K citations

, , +8

Feature extraction from faces using deformable templates

Alan Yuille, Peter W. Hallinan, David S. Cohen · International Journal of Computer Vision · 1992 · 1.4K citations

, , +16

HAMMER: hierarchical attribute matching mechanism for elastic registration

Dinggang Shen, Christos Davatzikos · IEEE Transactions on Medical Imaging · 2002 · 1.1K citations

, , +17

A Tutorial on Energy-Based Learning

Yann LeCun, Sumit Chopra, Raia Hadsell et al. · 2006 · 794 citations

, , +15

1–5 of 551

Authors

1.6K

  1. HA
    Harold A. Scheraga

    Cornell University, United States

    10 publications · 1K citations

    10

    h-index

  2. RZ
    Ramin Zabih

    Cornell University, United States

    7 publications · 11.1K citations

    7

    h-index

  3. JL
    Jooyoung Lee

    Korea Institute for Advanced Study, South Korea

    8 publications · 639 citations

    7

    h-index

  4. DR
    Daniel R. Ripoll

    Cornell University, United States

    6 publications · 574 citations

    6

    h-index

  5. AL
    Adam Liwo

    University of Gdańsk, Poland

    6 publications · 705 citations

    6

    h-index

1–5 of 1.6K

Institutions

582

  1. Cornell University

    Ithaca, United States

    17 h-index

    83 publications

    21.6K citations

  2. Chinese Academy of Sciences

    Beijing, China

    15 h-index

    51 publications

    2.6K citations

  3. Centre National de la Recherche Scientifique

    Paris, France

    11 h-index

    22 publications

    540 citations

  4. Stanford University

    Stanford, United States

    10 h-index

    24 publications

    2.2K citations

  5. Nanyang Technological University

    Singapore, Singapore

    10 h-index

    27 publications

    727 citations

  6. Tsinghua University

    Beijing, China

    9 h-index

    19 publications

    2K citations

  7. Seoul National University

    Seoul, South Korea

    8 h-index

    26 publications

    1.5K citations

  8. Johns Hopkins University

    Baltimore, United States

    8 h-index

    17 publications

    2.9K citations

1–8 of 582

Venues

  1. IEEE Transactions on Neural Networks

    16 publications · 968 citations

    15

    h-index

  2. Proteins Structure Function and Bioinformatics

    15 publications · 688 citations

    14

    h-index

  3. Journal of Computational Chemistry

    14 publications · 915 citations

    14

    h-index

  4. IEEE Transactions on Image Processing

    14 publications · 1.6K citations

    12

    h-index

  5. IEEE Transactions on Visualization and Computer Graphics

    TVCG · 10 publications · 655 citations

    10

    h-index

1–5