Concepedia

Docking Scoring Functions

Docking Scoring Functions is a computational method that belongs to the class of scoring functions in molecular modeling and specifically differs by quantifying the binding affinity and interaction stability between biomolecular partners in protein-ligand, protein-protein, and quaternary structure docking predictions.

622

Publications

135.4K

Citations

2K

Authors

774

Institutions

Publications per year

2017–2026

228

Parents

Publications

622

AutoDock Vina: Improving the speed and accuracy of docking with a new scoring function, efficient optimization, and multithreading

Oleg Trott, Arthur J. Olson · Journal of Computational Chemistry · 2009 · 37.1K citations · Full text

, , +17

Automated docking using a Lamarckian genetic algorithm and an empirical binding free energy function

Garrett M. Morris, David S. Goodsell, Robert S. Halliday et al. · Journal of Computational Chemistry · 1998 · 10.8K citations

, , +17

Extra Precision Glide:  Docking and Scoring Incorporating a Model of Hydrophobic Enclosure for Protein−Ligand Complexes

Richard A. Friesner, Robert B. Murphy, Matthew P. Repasky et al. · Journal of Medicinal Chemistry · 2006 · 6.9K citations

, , +16

AutoDock Vina 1.2.0: New Docking Methods, Expanded Force Field, and Python Bindings

Jérôme Eberhardt, Diogo Santos‐Martins, Andreas F. Tillack et al. · Journal of Chemical Information and Modeling · 2021 · 6.7K citations · Full text

, , +15

Glide:  A New Approach for Rapid, Accurate Docking and Scoring. 2. Enrichment Factors in Database Screening

Thomas A. Halgren, Robert B. Murphy, Richard A. Friesner et al. · Journal of Medicinal Chemistry · 2004 · 5.2K citations

, , +17

1–5 of 622

Authors

2K

  1. JF
    Juan Fernández‐Recio

    Universitat Politècnica de Catalunya, Spain

    15 publications · 1.8K citations

    14

    h-index

  2. TH
    Tingjun Hou

    Zhejiang University, China

    12 publications · 3.7K citations

    13

    h-index

  3. SH
    Sheng‐You Huang

    Huazhong University of Science and Technology, China

    12 publications · 453 citations

    12

    h-index

  4. AM
    Alexandre M. J. J. Bonvin

    Utrecht University, Netherlands

    11 publications · 1.7K citations

    11

    h-index

  5. ZW
    Zhiping Weng

    University of Massachusetts Chan Medical School, United States

    11 publications · 3.4K citations

    11

    h-index

1–5 of 2K

Institutions

774

  1. Centre National de la Recherche Scientifique

    Paris, France

    20 h-index

    67 publications

    7.4K citations

  2. Universitat Politècnica de Catalunya

    Barcelona, Spain

    15 h-index

    49 publications

    4.9K citations

  3. Barcelona Supercomputing Center

    Barcelona, Spain

    15 h-index

    48 publications

    4.9K citations

  4. Zhejiang University

    Hangzhou, China

    14 h-index

    74 publications

    16K citations

  5. Chinese Academy of Sciences

    Beijing, China

    13 h-index

    54 publications

    13.4K citations

  6. Utrecht University

    Utrecht, The Netherlands

    11 h-index

    45 publications

    7.8K citations

  7. Scripps Research Institute

    San Diego, United States

    11 h-index

    38 publications

    125.3K citations

  8. University of Missouri

    Columbia, United States

    10 h-index

    30 publications

    1.6K citations

1–8 of 774

Venues

  1. Journal of Chemical Information and Modeling

    JCIM · 107 publications · 18.1K citations

    51

    h-index

  2. Proteins Structure Function and Bioinformatics

    67 publications · 11.7K citations

    33

    h-index

  3. Journal of Medicinal Chemistry

    31 publications · 23.2K citations

    27

    h-index

  4. Journal of Computational Chemistry

    28 publications · 52.1K citations

    25

    h-index

  5. Bioinformatics

    22 publications · 1.7K citations

    20

    h-index

1–5