Concepedia

Docking Decoy Analysis

Docking Decoy Analysis is a computational evaluation method used in molecular docking that distinguishes true ligand poses from biologically implausible configurations by systematically assessing the ability of docking algorithms to prioritize native or near-native binding conformations against a set of decoy alternatives.

23

Publications

4.9K

Citations

112

Authors

48

Institutions

Publications per year

2017–2026

5

Parents

Publications

23

Directory of Useful Decoys, Enhanced (DUD-E): Better Ligands and Decoys for Better Benchmarking

Michael M. Mysinger, Michael Carchia, John J. Irwin et al. · Journal of Medicinal Chemistry · 2012 · 2.4K citations · Full text

, , +17

Benchmarking Sets for Molecular Docking

Niu Huang, Brian K. Shoichet, John J. Irwin · Journal of Medicinal Chemistry · 2006 · 1.3K citations · Full text

, , +17

Information Decay in Molecular Docking Screens against Holo, Apo, and Modeled Conformations of Enzymes

Susan L. McGovern, Brian K. Shoichet · Journal of Medicinal Chemistry · 2003 · 278 citations

, , +17

CSAR Data Set Release 2012: Ligands, Affinities, Complexes, and Docking Decoys

James B. Dunbar, Richard D. Smith, Kelly L. Damm‐Ganamet et al. · Journal of Chemical Information and Modeling · 2013 · 125 citations · Full text

, , +17

Decoys for Docking

Alan P. Graves, Ruth Brenk, Brian K. Shoichet · Journal of Medicinal Chemistry · 2005 · 108 citations · Full text

, , +17

1–5 of 23

Authors

112

  1. BK
    Brian K. Shoichet

    University of California, San Francisco, United States

    4 publications · 4.1K citations

    4

    h-index

  2. JJ
    John J. Irwin

    University of California, San Francisco, United States

    2 publications · 3.7K citations

    2

    h-index

  3. TB
    Thijs Beuming

    Schrodinger (United States), United States

    1 publications · 49 citations

    1

    h-index

  4. WH
    Wail Hussein Ahmed Al-Ameer

    Wenzhou Medical University, China

    1 publications · 54 citations

    1

    h-index

  5. GK
    Ginger Kubish

    University of Michigan, United States

    1 publications · 125 citations

    1

    h-index

1–5 of 112

Institutions

48

  1. University of California, San Francisco

    San Francisco, United States

    4 h-index

    12 publications

    14.5K citations

  2. University of Sheffield

    Sheffield, United Kingdom

    1 h-index

    4 publications

    324 citations

  3. First Affiliated Hospital of Henan University

    Kaifeng, China

    1 h-index

    1 publications

    15 citations

  4. Shandong University of Traditional Chinese Medicine

    Jinan, China

    1 h-index

    1 publications

    15 citations

  5. First Affiliated Hospital of Wenzhou Medical University

    Wenzhou, China

    1 h-index

    8 publications

    432 citations

  6. Institute of Oceanology

    Qingdao, China

    1 h-index

    3 publications

    120 citations

  7. Northwestern University

    Evanston, United States

    1 h-index

    2 publications

    556 citations

  8. Northwest University

    Xi'an, China

    1 h-index

    8 publications

    120 citations

1–8 of 48

Venues

  1. Journal of Chemical Information and Modeling

    JCIM · 6 publications · 422 citations

    6

    h-index

  2. Proteins Structure Function and Bioinformatics

    5 publications · 203 citations

    5

    h-index

  3. Journal of Medicinal Chemistry

    4 publications · 4.1K citations

    4

    h-index

  4. Journal of Ethnopharmacology

    1 publications · 15 citations

    1

    h-index

  5. BMC Bioinformatics

    1 publications · 11 citations

    1

    h-index

1–5