Concepedia

Contig Bridging

Contig Bridging is a computational method in hybrid assembly that integrates long-read and short-read sequencing data to span gaps between contigs, thereby reconstructing continuous genomic regions with enhanced accuracy and completeness.

11

Publications

1.6K

Citations

77

Authors

35

Institutions

Publications per year

2017–2026

4

Parents

Publications

11

TGS-GapCloser: A fast and accurate gap closer for large genomes with low coverage of error-prone long reads

Mengyang Xu, Lidong Guo, Shengqiang Gu et al. · GigaScience · 2020 · 495 citations · Full text

, , +17

Anchoring and ordering <scp>NGS</scp> contig assemblies by population sequencing (<scp>POPSEQ</scp>)

Martin Mascher, Gary J. Muehlbauer, Daniel S. Rokhsar et al. · The Plant Journal · 2013 · 266 citations · Full text

, , +17

LR_Gapcloser: a tiling path-based gap closer that uses long reads to complete genome assembly

Gui-Cai Xu, Tianjun Xu, Yan Zhang et al. · GigaScience · 2018 · 250 citations · Full text

, , +14

The Value of Nonmodel Genomes and an Example Using SynMap Within CoGe to Dissect the Hexaploidy that Predates the Rosids

Eric Lyons, Brent S. Pedersen, Josh Kane et al. · Tropical Plant Biology · 2008 · 227 citations

, , +14

Sealer: a scalable gap-closing application for finishing draft genomes

Daniel Paulino, René L. Warren, Benjamin P. Vandervalk et al. · BMC Bioinformatics · 2015 · 156 citations · Full text

, , +15

1–5 of 11

Authors

77

  1. PA
    Petri Auvinen

    University of Helsinki, Finland

    1 publications · 26 citations

    1

    h-index

  2. JL
    Jiong-Tang Li

    Chinese Academy of Fishery Sciences, China

    1 publications · 250 citations

    1

    h-index

  3. MG
    Michel Georges

    University of Liège, Belgium

    1 publications · 21 citations

    1

    h-index

  4. TX
    Tianjun Xu

    Zhejiang Ocean University, China

    1 publications · 250 citations

    1

    h-index

  5. MM
    María Muñoz‐Amatriaín

    University of California, Riverside, United States

    1 publications · 266 citations

    1

    h-index

1–5 of 77

Institutions

35

  1. University of Helsinki

    Helsinki, Finland

    2 h-index

    9 publications

    474 citations

  2. University of California, Berkeley

    Berkeley, United States

    2 h-index

    5 publications

    1.2K citations

  3. Ministry of Agriculture and Rural Affairs

    Beijing, China

    1 h-index

    6 publications

    1.5K citations

  4. University of North Carolina at Chapel Hill

    Chapel Hill, United States

    1 h-index

    1 publications

    70 citations

  5. University of Chinese Academy of Sciences

    Beijing, China

    1 h-index

    2 publications

    990 citations

  6. Washington University in St. Louis

    St Louis, United States

    1 h-index

    6 publications

    324 citations

  7. Institute of Bioinformatics and Systems Biology

    Oberschleißheim, Germany

    1 h-index

    1 publications

    266 citations

  8. China National GeneBank

    Shenzhen, China

    1 h-index

    2 publications

    990 citations

1–8 of 35

Venues

  1. GigaScience

    2 publications · 745 citations

    2

    h-index

  2. Animal Genetics

    1 publications · 21 citations

    1

    h-index

  3. BMC Bioinformatics

    1 publications · 156 citations

    1

    h-index

  4. Tropical Plant Biology

    1 publications · 227 citations

    1

    h-index

  5. Bioinformatics

    1 publications · 54 citations

    1

    h-index

1–5