Concepedia

Comparative Protein Model Accuracy

Comparative Protein Model Accuracy is a metric that quantifies the structural or functional fidelity of a computationally predicted protein model relative to a reference experimental structure by evaluating deviations in spatial coordinates, residue packing, or energy profiles within the context of homology-based or template-assisted modeling.

59

Publications

5.5K

Citations

153

Authors

88

Institutions

Publications per year

2017–2026

10

Parents

Publications

59

ModBase, a database of annotated comparative protein structure models, and associated resources

Ursula Pieper, Benjamin Webb, David T. Barkan et al. · Nucleic Acids Research · 2010 · 1.1K citations · Full text

, , +17

High‐accuracy protein structure prediction in <scp>CASP14</scp>

Joana Pereira, Adam J. Simpkin, Marcus D. Hartmann et al. · Proteins Structure Function and Bioinformatics · 2021 · 338 citations · Full text

, , +10

Comparative protein structure modeling by iterative alignment, model building and model assessment

Binu V. John · Nucleic Acids Research · 2003 · 323 citations · Full text

, , +16

MODBASE, a database of annotated comparative protein structure models, and associated resources

Ursula Pieper · Nucleic Acids Research · 2003 · 213 citations · Full text

, , +17

How good are AlphaFold models for docking-based virtual screening?

Valeria Scardino, Juan I. Di Filippo, Claudio N. Cavasotto · iScience · 2022 · 196 citations · Full text

, , +16

1–5 of 59

Authors

153

  1. KF
    Krzysztof Fidelis

    University of California, Davis, United States

    10 publications · 757 citations

    10

    h-index

  2. JM
    John Moult

    Biotechnology Institute, United States

    7 publications · 558 citations

    7

    h-index

  3. AK
    Andriy Kryshtafovych

    University of California, Davis, United States

    7 publications · 625 citations

    7

    h-index

  4. AŠ
    Andrej Šali

    University of California, San Francisco, United States

    6 publications · 1.5K citations

    6

    h-index

  5. AT
    Anna Tramontano

    Sapienza University of Rome, Italy

    4 publications · 404 citations

    4

    h-index

1–5 of 153

Institutions

88

  1. University of California, Davis

    Davis, United States

    7 h-index

    16 publications

    1.4K citations

  2. Biotechnology Institute

    Washington D.C., United States

    6 h-index

    6 publications

    453 citations

  3. University of California, San Francisco

    San Francisco, United States

    5 h-index

    23 publications

    18.6K citations

  4. QB3

    San Francisco, United States

    5 h-index

    27 publications

    19.3K citations

  5. Lawrence Livermore National Laboratory

    Livermore, United States

    5 h-index

    9 publications

    461 citations

  6. SIB Swiss Institute of Bioinformatics

    Lausanne, Switzerland

    4 h-index

    13 publications

    1.9K citations

  7. Pontificia Universidad Católica de Chile

    Santiago, Chile

    3 h-index

    4 publications

    303 citations

  8. Sapienza University of Rome

    Rome, Italy

    3 h-index

    4 publications

    269 citations

1–8 of 88

Venues

  1. Proteins Structure Function and Bioinformatics

    26 publications · 2.1K citations

    21

    h-index

  2. Nucleic Acids Research

    5 publications · 1.8K citations

    5

    h-index

  3. Protein Science

    PS · 4 publications · 438 citations

    4

    h-index

  4. Journal of Chemical Theory and Computation

    JCTC · 3 publications · 142 citations

    3

    h-index

  5. Bioinformatics

    2 publications · 162 citations

    2

    h-index

1–5