Concepedia

Cell State Progression

Cell State Progression is a biological inference model that distinguishes itself from other trajectory analysis methods by reconstructing the dynamic sequence of cellular states during differentiation or development based on high-dimensional single-cell expression data.

96

Publications

14.8K

Citations

516

Authors

195

Institutions

Publications per year

2017–2026

43

Parents

Publications

96

SCENIC: single-cell regulatory network inference and clustering

Sara Aibar, Carmen Bravo González‐Blas, Thomas Moerman et al. · Nature Methods · 2017 · 6.9K citations · Full text

, , +17

Single-Cell Trajectory Detection Uncovers Progression and Regulatory Coordination in Human B Cell Development

Sean C. Bendall, Kara L. Davis, El-ad David Amir et al. · Cell · 2014 · 990 citations · Full text

, , +16

Diffusion maps for high-dimensional single-cell analysis of differentiation data

Laleh Haghverdi, Florian Buettner, Fabian J. Theis · Bioinformatics · 2015 · 716 citations · Full text

, , +16

Wishbone identifies bifurcating developmental trajectories from single-cell data

Manu Setty, Michelle D. Tadmor, Shlomit Reich-Zeliger et al. · Nature Biotechnology · 2016 · 631 citations · Full text

, , +16

Single-Cell Genomics Reveals a Novel Cell State During Smooth Muscle Cell Phenotypic Switching and Potential Therapeutic Targets for Atherosclerosis in Mouse and Human

Huize Pan, Chenyi Xue, Benjamin J. Auerbach et al. · Circulation · 2020 · 620 citations · Full text

, , +17

1–5 of 96

Authors

516

  1. SC
    Sean C. Bendall

    Stanford University, United States

    5 publications · 1.9K citations

    5

    h-index

  2. DP
    Dana Pe’er

    Memorial Sloan Kettering Cancer Center, United States

    4 publications · 1.8K citations

    4

    h-index

  3. MD
    Michelle D. Tadmor

    Columbia University, United States

    3 publications · 1.7K citations

    3

    h-index

  4. QN
    Qing Nie

    University of California, Irvine, United States

    3 publications · 263 citations

    3

    h-index

  5. SH
    Sui Huang

    Institute for Systems Biology, United States

    3 publications · 235 citations

    3

    h-index

1–5 of 516

Institutions

195

  1. Stanford University

    Stanford, United States

    5 h-index

    27 publications

    8.3K citations

  2. Harvard University

    Cambridge, United States

    5 h-index

    14 publications

    1.1K citations

  3. Columbia University

    New York, United States

    4 h-index

    13 publications

    7.5K citations

  4. Yale University

    New Haven, United States

    3 h-index

    8 publications

    315 citations

  5. University of Washington

    Seattle, United States

    3 h-index

    3 publications

    309 citations

  6. Johns Hopkins University

    Baltimore, United States

    3 h-index

    16 publications

    339 citations

  7. University of Pennsylvania

    Philadelphia, United States

    3 h-index

    14 publications

    1.7K citations

  8. California Institute of Technology

    Pasadena, United States

    3 h-index

    7 publications

    603 citations

1–8 of 195

Venues

  1. PubMed

    Repository · 7 publications · 424 citations

    7

    h-index

  2. Nature Communications

    6 publications · 540 citations

    6

    h-index

  3. bioRxiv (Cold Spring Harbor Laboratory)

    Repository · 6 publications · 208 citations

    6

    h-index

  4. Scientific Reports

    4 publications · 160 citations

    4

    h-index

  5. PLoS Computational Biology

    4 publications · 235 citations

    4

    h-index

1–5