Concepedia

Assembly Of Complex Microbiomes

Assembly of Complex Microbiomes is a computational method in metagenomics that reconstructs complete microbial genomes from heterogeneous environmental sequencing data, distinguishing itself by addressing high species diversity, uneven abundance, and sequence similarity among taxa in complex microbial communities.

9

Publications

725

Citations

59

Authors

45

Institutions

Publications per year

2017–2026

8

Parents

Publications

9

Tackling soil diversity with the assembly of large, complex metagenomes

Adina Chuang Howe, Janet Jansson, Stephanie Malfatti et al. · Proceedings of the National Academy of Sciences · 2014 · 356 citations · Full text

, , +16

Introducing THOR, a Model Microbiome for Genetic Dissection of Community Behavior

Gabriel L. Lozano, Juan I. Bravo, Manuel F. Garavito Diago et al. · mBio · 2019 · 84 citations · Full text

, , +17

Strainberry: automated strain separation in low-complexity metagenomes using long reads

Riccardo Vicedomini, Christopher Quince, Aaron E. Darling et al. · Nature Communications · 2021 · 67 citations · Full text

, , +17

Characterization of the Leaf Microbiome from Whole-Genome Sequencing Data of the 3000 Rice Genomes Project

Verónica Román-Reyna, Dale Pinili, Frances Nikki Borja et al. · Rice · 2020 · 53 citations · Full text

, , +16

Distinct factors drive the assembly of quinoa-associated microbiomes along elevation

Zhiquan Cai, Xiaobo Wang, Sreetama Bhadra et al. · Plant and Soil · 2020 · 50 citations

, , +14

1–5 of 9

Authors

59

  1. SC
    Simon C. Groen

    New York University, United States

    1 publications · 53 citations

    1

    h-index

  2. AS
    Anna Sintsova

    ETH Zurich, Switzerland

    1 publications · 30 citations

    1

    h-index

  3. JM
    James M. Tiedje

    Michigan State University, United States

    1 publications · 356 citations

    1

    h-index

  4. NM
    Nicholas M. Fountain‐Jones

    University of Tasmania, Australia

    1 publications · 13 citations

    1

    h-index

  5. FN
    Frances Nikki Borja

    International Rice Research Institute, Philippines

    1 publications · 53 citations

    1

    h-index

1–5 of 59

Institutions

45

  1. University of Georgia

    Athens, United States

    2 h-index

    2 publications

    97 citations

  2. Lawrence Berkeley National Laboratory

    Berkeley, United States

    1 h-index

    1 publications

    356 citations

  3. École Normale Supérieure - PSL

    Paris, France

    1 h-index

    1 publications

    13 citations

  4. Harvard University

    Cambridge, United States

    1 h-index

    1 publications

    24 citations

  5. Uppsala University

    Uppsala, Sweden

    1 h-index

    1 publications

    13 citations

  6. Xishuangbanna Tropical Botanical Garden

    Mengla, China

    1 h-index

    3 publications

    150 citations

  7. Evolution et Diversité Biologique

    Toulouse, France

    1 h-index

    1 publications

    13 citations

  8. ETH Zurich

    Zurich, Switzerland

    1 h-index

    10 publications

    300 citations

1–8 of 45

Venues

  1. mSystems

    1 publications · 48 citations

    1

    h-index

  2. Nature Microbiology

    1 publications · 30 citations

    1

    h-index

  3. Rice

    1 publications · 53 citations

    1

    h-index

  4. The ISME Journal

    1 publications · 24 citations

    1

    h-index

  5. Nature Communications

    1 publications · 67 citations

    1

    h-index

1–5