Archaea Publications

Publications in Archaea

Explore the most influential research papers and scholarly works that have shaped Archaea. Use the concept filter below to focus on a specific sub-area of research.

Archaea

5.5K

Publications

522.4K

Citations

Showing yearly statistics from 2000-2026.

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	Year	Citations
The SILVA ribosomal RNA gene database project: improved data processing and web-based tools Christian Quast, Elmar Pruesse, Pelin Yilmaz, Nucleic Acids Research Ribosomal RnaGeneticsGenomicsSequence AlignmentArchaea	2012	32.2K
Introducing EzBioCloud: a taxonomically united database of 16S rRNA gene sequences and whole-genome assemblies Seok-Hwan Yoon, Sung Min Ha, Soon‐Jae Kwon, INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY Rrna Gene SequencesGeneticsGenomicsSequence AlignmentArchaea	2016	7.5K
Towards a natural system of organisms: proposal for the domains Archaea, Bacteria, and Eucarya. C R Woese, O. Kandler, Mark L. Wheelis Proceedings of the National Academy of Sciences TaxonomyArchaeaEndosymbiosisMicrobial EvolutionUnicellular Organism	1990	6K
The Ribosomal Database Project: improved alignments and new tools for rRNA analysis James R. Cole, Qi Wang, Erick Cardenas, Nucleic Acids Research Structural BioinformaticsMolecular BiologyGenomicsSequence AlignmentArchaea	2008	4.8K
The COG database: a tool for genome-scale analysis of protein functions and evolution Roman L. Tatusov Nucleic Acids Research EngineeringProtein FunctionsRational ClassificationGeneticsGenomics	2000	4.6K
Phylogenetic identification and in situ detection of individual microbial cells without cultivation. Rudolf Amann, Wolfgang Ludwig, Karl Heinz Schleifer Microbiological Reviews EngineeringArchaeaMicrobial EvolutionPhylogenetic AnalysisMicrobial Ecology	1995	4.2K
The SILVA and “All-species Living Tree Project (LTP)” taxonomic frameworks Pelin Yilmaz, Laura Wegener Parfrey, Pablo Yarza, Nucleic Acids Research EngineeringBotanyRibosomal RnaTaxonomyForestry	2013	3.9K
Towards a taxonomic coherence between average nucleotide identity and 16S rRNA gene sequence similarity for species demarcation of prokaryotes Mincheol Kim, Hyun‐Seok Oh, Sang‐Cheol Park, INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY Taxonomic CoherenceComparative GenomicsGeneticsTaxonomyAni Threshold Range	2014	3K
Isolation of an autotrophic ammonia-oxidizing marine archaeon Martin Könneke, Anne E. Bernhard, José R. de la Torre, Nature EngineeringMarine ChemistryMicrobial EcologyEnvironmental MicrobiologyArchaea	2005	2.8K
Archaea in coastal marine environments. Edward F. DeLong Proceedings of the National Academy of Sciences Microbial DiversityMicrobial SystematicsEngineeringTotal Ribosomal RnaUnusual Archaea	1992	2.7K
Archaea predominate among ammonia-oxidizing prokaryotes in soils Sven Leininger, Tim Urich, Michael Schloter, Nature Microbial DiversityEngineeringMicrobial EcologySoil MicrobiologyEnvironmental Microbiology	2006	2.5K
Insights into the phylogeny and coding potential of microbial dark matter Christian Rinke, Patrick Schwientek, Alexander Sczyrba, Nature EngineeringArchaeaMicrobial EvolutionHigh Throughput SequencingUnicellular Organism	2013	2.4K

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