Felipe Llinares-López

InterPro: the protein sequence classification resource in 2025

Matthias Blum, Antonina Andreeva, Laise Cavalcanti Florentino et al. · Nucleic Acids Research · 2024 · 885 citations · Full text

Life Sciences, Bioinformatics, Biology +14

The Pfam protein families database: embracing AI/ML

Typhaine Paysan‐Lafosse, Antonina Andreeva, Matthias Blum et al. · Nucleic Acids Research · 2024 · 267 citations · Full text

Life Sciences, Bioinformatics, Biology +15

DeepConsensus improves the accuracy of sequences with a gap-aware sequence transformer

Gunjan Baid, Daniel E. Cook, Kishwar Shafin et al. · Nature Biotechnology · 2022 · 153 citations

Life Sciences, Bioinformatics, Sequence Analysis +9

Fast and Memory-Efficient Significant Pattern Mining via Permutation Testing

Felipe Llinares-López, Mahito Sugiyama, Laetitia Papaxanthos et al. · 2015 · 64 citations

Computing, Computer Science, Big Data Analytics +9

Wasserstein Weisfeiler-Lehman Graph Kernels

Matteo Togninalli, Elisabetta Ghisu, Felipe Llinares-López et al. · arXiv (Cornell University) · 2019 · 62 citations · Full text

Computing, Computer Science, Data Mining +16