William A. Baumgartner

Author

Also Known As

Baumgartner Jr, William A, Baumgartner, William, Baumgartner, William A., W A Baumgartner, WILLIAM A. BAUMGARTNER, William A Baumgartner, William A. Baumgartner, William A. Baumgartner Jr, William Baumgartner

Publications

2.7K

Citations

H-Index

Concepts

All Affiliations

University of Colorado Denver University of Colorado Boulder Data61 University of Colorado Anschutz Medical Campus Johns Hopkins University

About

William A. Baumgartner is an author at University of Colorado Denver specializing in engineering, natural language processing, and knowledge discovery.

Top Concepts

#	Concept	H-Index	Publications	Citations
1	Engineering	9	9	276
2	Language Studies	4	4	118
3	Medicine	3	3	100
4	Anatomy	1	1	60
5	Biology	1	1	13

William A. Baumgartner

Publications

2.7K

Citations

H-Index

Page 1

	Year	Citations
Overview of BioCreative II gene mention recognition Larry Smith, Lorraine Tanabe, R. Ando, Genome biology	2008	485
Concept annotation in the CRAFT corpus Michael Bada, Miriam Eckert, Donald L. Evans, BMC Bioinformatics	2012	274
Manual curation is not sufficient for annotation of genomic databases William A. Baumgartner, Kevin Bretonnel Cohen, Lynne M. Fox, Bioinformatics	2007	235
MutationFinder: a high-performance system for extracting point mutation mentions from text J. Gregory Caporaso, William A. Baumgartner, David A. Randolph, Bioinformatics	2007	163
OpenDMAP: An open source, ontology-driven concept analysis engine, with applications to capturing knowledge regarding protein transport, protein interactions and cell-type-specific gene expression Lawrence Hunter, Zhiyong Lu, James Firby, BMC Bioinformatics	2008	154
BioLemmatizer: a lemmatization tool for morphological processing of biomedical text Haibin Liu, Tom Christiansen, William A. Baumgartner, Journal of Biomedical Semantics	2012	154
A corpus of full-text journal articles is a robust evaluation tool for revealing differences in performance of biomedical natural language processing tools Karin Verspoor, Kevin Bretonnel Cohen, Arrick Lanfranchi, BMC Bioinformatics	2012	144
Large-scale biomedical concept recognition: an evaluation of current automatic annotators and their parameters Christopher Funk, William A. Baumgartner, Benjamin J. Garcia, BMC Bioinformatics	2014	128
KaBOB: ontology-based semantic integration of biomedical databases Kevin Livingston, Michael Bada, William A. Baumgartner, BMC Bioinformatics	2015	94
Introducing meta-services for biomedical information extraction Florian Leitner, Martin Krallinger, Carlos Gerardo Rodriguez-Penagos, Genome biology	2008	83

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