Ryan Kelley

TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions

Daehwan Kim, Geo Pertea, Cole Trapnell et al. · Genome biology · 2013 · 13.7K citations · Full text

Life Sciences, Bioinformatics, Genetics +14

Integration of biological networks and gene expression data using Cytoscape

Melissa Cline, Michael Smoot, Ethan Cerami et al. · Nature Protocols · 2007 · 2.6K citations

Life Sciences, Bioinformatics, Molecular Biology +14

The druggable genome and support for target identification and validation in drug development

Chris Finan, Anna Gaulton, Felix Krüger et al. · Science Translational Medicine · 2017 · 1K citations

Pharmacy, Bioinformatics, Genetics +17

Conserved patterns of protein interaction in multiple species

Roded Sharan, Silpa Suthram, Ryan Kelley et al. · Proceedings of the National Academy of Sciences · 2005 · 812 citations · Full text

Life Sciences, Bioinformatics, Molecular Biology +17

Systematic interpretation of genetic interactions using protein networks

Ryan Kelley, Trey Ideker · Nature Biotechnology · 2005 · 446 citations · Full text

Life Sciences, Bioinformatics, Genetics +16