Alexander Mitrofanov

CRISPRidentify: identification of CRISPR arrays using machine learning approach

Alexander Mitrofanov, Omer S. Alkhnbashi, Sergey Shmakov et al. · Nucleic Acids Research · 2020 · 94 citations · Full text

Life Sciences, Bioinformatics, Molecular Biology +9

<tt>CRISPRloci:</tt> comprehensive and accurate annotation of CRISPR–Cas systems

Omer S. Alkhnbashi, Alexander Mitrofanov, Robson Parmezan Bonidia et al. · Nucleic Acids Research · 2021 · 45 citations · Full text

Life Sciences, Genetics, Molecular Biology +11

Anti-CRISPR prediction using deep learning reveals an inhibitor of Cas13b nucleases

Katharina G. Wandera, Omer S. Alkhnbashi, Harris V. Bassett et al. · Molecular Cell · 2022 · 44 citations

Life Sciences, Genetics, Molecular Biology +12

CRISPRtracrRNA: robust approach for CRISPR tracrRNA detection

Alexander Mitrofanov, Marcus Ziemann, Omer S. Alkhnbashi et al. · Bioinformatics · 2022 · 18 citations · Full text

Life Sciences, Genetics, Molecular Biology +13

SpacerPlacer: ancestral reconstruction of CRISPR arrays reveals the evolutionary dynamics of spacer deletions

Axel Fehrenbach, Alexander Mitrofanov, Omer S. Alkhnbashi et al. · Nucleic Acids Research · 2024 · 10 citations · Full text

Life Sciences, Evolutionary Biology, Microbiology +15