Zhe Wang

Comprehensive evaluation of ten docking programs on a diverse set of protein–ligand complexes: the prediction accuracy of sampling power and scoring power

Zhe Wang, Huiyong Sun, Xiaojun Yao et al. · Physical Chemistry Chemical Physics · 2016 · 959 citations

Life Sciences, Bioinformatics, Medicinal Chemistry +17

APD2: the updated antimicrobial peptide database and its application in peptide design

Guangshun Wang, Xia Li, Zhe Wang · Nucleic Acids Research · 2008 · 936 citations · Full text

Life Sciences, Biochemistry, Bioinformatics +17

HawkDock: a web server to predict and analyze the protein–protein complex based on computational docking and MM/GBSA

Gaoqi Weng, Ercheng Wang, Zhe Wang et al. · Nucleic Acids Research · 2019 · 647 citations · Full text

Life Sciences, Bioinformatics, Molecular Biology +17

Could graph neural networks learn better molecular representation for drug discovery? A comparison study of descriptor-based and graph-based models

Dejun Jiang, Chang‐Yu Hsieh, Guangyong Chen et al. · Journal of Cheminformatics · 2021 · 623 citations · Full text

Pharmacy, Medicinal Chemistry, Drug Design +16

Assessing the performance of MM/PBSA and MM/GBSA methods. 7. Entropy effects on the performance of end-point binding free energy calculation approaches

Huiyong Sun, Lili Duan, Fu Chen et al. · Physical Chemistry Chemical Physics · 2018 · 363 citations

Natural Sciences, Biophysics, Medicinal Chemistry +17