Floral gene resources from basal angiosperms for comparative genomics research

Victor A. Albert, John E. Carlson, William G. Farmerie, +20

BMC Plant Biology

Defining Loci in Restriction-Based Reduced Representation Genomic Data from Nonmodel Species: Sources of Bias and Diagnostics for Optimal Clustering

Daniel C. Ilut, Marie L. Nydam, Matthew P. Hare

BioMed Research International

GeneticsGenomicsLandscape GeneticsHigh Throughput SequencingGenome-wide Association Study +24

Novel Loci Underlie Natural Variation in Vitamin E Levels in Maize Grain

Christine Diepenbrock, Catherine B. Kandianis, Alexander E. Lipka, +17

The Plant Cell

A comparative transcriptomic study of an allotetraploid and its diploid progenitors illustrates the unique advantages and challenges of RNA‐seq in plant species

Daniel C. Ilut, Jeremy E. Coate, Amelia K. Luciano, +4

American Journal of Botany

A sorghum practical haplotype graph facilitates genome‐wide imputation and cost‐effective genomic prediction

Sarah E. Jensen, Jean Rigaud Charles, Kebede T. Muleta, +18

The Plant Genome

GeneticsGenomicsGenomic SelectionSorghum PhgCost‐effective Genomic Prediction +14

Genome-wide analysis of the omega-3 fatty acid desaturase gene family in Gossypium

O. P. Yurchenko, Sunjung Park, Daniel C. Ilut, +9

BMC Plant Biology

rAmpSeq: Using repetitive sequences for robust genotyping

Edward S. Buckler, Daniel C. Ilut, Xiaoyun Wang, +3

GeneticsGenomicsGenomic SelectionPcr AmplificationMolecular Ecology +16

Identification of haplotypes at the Rsv4 genomic region in soybean associated with durable resistance to soybean mosaic virus

Daniel C. Ilut, Alexander E. Lipka, Namhee Jeong, +12

Theoretical and Applied Genetics

Plant VirusMosaic VirusPlant-virus InteractionGeneticsDurable Resistance +10

Eleven biosynthetic genes explain the majority of natural variation in carotenoid levels in maize grain

Christine Diepenbrock, Daniel C. Ilut, Maria Magallanes‐Lundback, +18

The Plant Cell

EST database for early flower development in California poppy (Eschscholzia californica Cham., Papaveraceae) tags over 6000 genes from a basal eudicot

John E. Carlson, Jim Leebens‐Mack, P. Kerr Wall, +12

Plant Molecular Biology

BiologyPlant GeneticsPhylogeneticsBotanyMolecular Ecology +12