Evaluation and Strategy for Use of MIRU-VNTR<i>plus</i>, a Multifunctional Database for Online Analysis of Genotyping Data and Phylogenetic Identification of<i>Mycobacterium tuberculosis</i>Complex Isolates

Caroline Allix‐Béguec, Dag Harmsen, Thomas Weniger, +2

Journal of Clinical Microbiology

EngineeringMycobacterium Tuberculosis ComplexGeneticsTuberculosis PreventionGenomics +23

MIRU-VNTRplus: a web tool for polyphasic genotyping of Mycobacterium tuberculosis complex bacteria

Thomas Weniger, Jacek B. Krawczyk, Philip Supply, +2

Nucleic Acids Research

EngineeringMycobacterium Tuberculosis ComplexBacteriophageMolecular BiologyGenomics +23

Assignment of <i>Staphylococcus</i> Isolates to Groups by <i>spa</i> Typing, SmaI Macrorestriction Analysis, and Multilocus Sequence Typing

Birgit Strommenger, Christiane Kettlitz, Thomas Weniger, +3

Journal of Clinical Microbiology

Based Upon Repeat Pattern (BURP): an algorithm to characterize the long-term evolution of Staphylococcus aureus populations based on spa polymorphisms

Alexander Mellmann, Thomas Weniger, Christoph Berssenbrügge, +4

BMC Microbiology

Whole-Genome-Based Mycobacterium tuberculosis Surveillance: a Standardized, Portable, and Expandable Approach

Thomas A. Kohl, Roland Diel, Dag Harmsen, +5

Journal of Clinical Microbiology

Characterization of Clonal Relatedness among the Natural Population of <i>Staphylococcus aureus</i> Strains by Using <i>spa</i> Sequence Typing and the BURP (Based upon Repeat Patterns) Algorithm

Alexander Mellmann, Thomas Weniger, Christoph Berssenbrügge, +4

Journal of Clinical Microbiology

Molecular EpidemiologyGeneticsStaphylococcus AureusRepeat PatternsGenomics +16

Phylogenetic and Molecular Analysis of Food-Borne Shiga Toxin-Producing Escherichia coli

Elisabeth Hauser, Alexander Mellmann, Torsten Semmler, +9

Applied and Environmental Microbiology

ToxinologyPathogen DetectionImportant PathogensPathologyMolecular Analysis +16

Phylogenetic Analysis of Enterohemorrhagic<i>Escherichia coli</i>O157, Germany, 1987–2008

Christian Jenke, Dag Harmsen, Thomas Weniger, +5

Emerging infectious diseases

Pathogenic MicrobiologyMicrobial PathogensMedicineMlva ProfilesPathogen Characterization +10

Ridom TraceEdit: a DNA trace editor and viewer

Jörg Rothgänger, Markus Weniger, Thomas Weniger, +2

Bioinformatics

EngineeringGeneticsDna AnalysisMolecular BiologyPathology +17

Online tools for polyphasic analysis of Mycobacterium tuberculosis complex genotyping data: Now and next

Thomas Weniger, Justina Krawczyk, Philip Supply, +2

Infection Genetics and Evolution

Medical MicrobiologyPulmonary TuberculosisEngineeringBiological DatabaseMycobacterium Tuberculosis Complex +11