Tomoki Nakayoshi

Mechanisms of Deamidation of Asparagine Residues and Effects of Main-Chain Conformation on Activation Energy

Koichi Kato, Tomoki Nakayoshi, Eiji Kurimoto et al. · International Journal of Molecular Sciences · 2020 · 54 citations · Full text

Engineering, Protein Assembly, Molecular Biology +21

Molecular dynamics simulations for the protein–ligand complex structures obtained by computational docking studies using implicit or explicit solvents

Koichi Kato, Tomoki Nakayoshi, Eiji Kurimoto et al. · Chemical Physics Letters · 2021 · 42 citations

Engineering, Biochemistry, Explicit Solvents +10

Functional Characterization of 40 CYP3A4 Variants by Assessing Midazolam 1′-Hydroxylation and Testosterone 6β-Hydroxylation

Masaki Kumondai, Evelyn Marie Gutiérrez Rico, Eiji Hishinuma et al. · Drug Metabolism and Disposition · 2020 · 40 citations · Full text

Validation of Molecular Dynamics Simulations for Prediction of Three-Dimensional Structures of Small Proteins

Koichi Kato, Tomoki Nakayoshi, Shuichi Fukuyoshi et al. · Molecules · 2017 · 36 citations · Full text

Structural Bioinformatics, Biomolecular Structure Prediction, Protein Folding +13

Computational Studies on the Nonenzymatic Deamidation Mechanisms of Glutamine Residues

Koichi Kato, Tomoki Nakayoshi, Eiji Kurimoto et al. · ACS Omega · 2019 · 27 citations · Full text