Stephen E. Farr

OpenMM 8: Molecular Dynamics Simulation with Machine Learning Potentials

Peter Eastman, Raimondas Galvelis, Raúl P. Peláez et al. · The Journal of Physical Chemistry B · 2023 · 350 citations · Full text

Engineering, Machine Learning, Physics +15

Nucleosome plasticity is a critical element of chromatin liquid–liquid phase separation and multivalent nucleosome interactions

Stephen E. Farr, Esmae J. Woods, Jerelle A. Joseph et al. · Nature Communications · 2021 · 169 citations · Full text

Emergence of chromatin hierarchical loops from protein disorder and nucleosome asymmetry

Akshay Sridhar, Stephen E. Farr, Guillem Portella et al. · Proceedings of the National Academy of Sciences · 2020 · 46 citations · Full text

Biophysical Modeling, Such Ctd Disorder, Protein Disorder +23

OpenMM 8: Molecular Dynamics Simulation with Machine Learning Potentials

Peter Eastman, Raimondas Galvelis, Raúl P. Peláez et al. · arXiv (Cornell University) · 2023 · 20 citations · Full text

DNA binds to a specific site of the adhesive blood-protein von Willebrand factor guided by electrostatic interactions

Angélica Sandoval‐Pérez, Ricarda Berger, Adiran Garaizar et al. · Nucleic Acids Research · 2020 · 19 citations · Full text

Biophysical Modeling, Cell Adhesion, Vwf A1 Domain +17