Diversity of the Human Intestinal Microbial Flora

Paul B. Eckburg, Elisabeth M. Bik, Çharles N. Bernstein, +5

Science

DysbiosisHealthy SubjectsHost-microbe InteractionsImmensely Diverse EcosystemHuman Microbial Flora +14

Incomplete recovery and individualized responses of the human distal gut microbiota to repeated antibiotic perturbation

Les Dethlefsen, David A. Relman

Proceedings of the National Academy of Sciences

The Pervasive Effects of an Antibiotic on the Human Gut Microbiota, as Revealed by Deep 16S rRNA Sequencing

Les Dethlefsen, S. M. Huse, Mitchell L. Sogin, +1

PLoS Biology

DysbiosisHost-microbe InteractionsHuman Gut MicrobiotaAntibiotic ResistancePretreatment Community Composition +17

Exploring Microbial Diversity and Taxonomy Using SSU rRNA Hypervariable Tag Sequencing

Susan M. Huse, Les Dethlefsen, Julie A. Huber, +3

PLoS Genetics

BiologyRrna SequencesMicrobial DiversitySsu RrnaEngineering +13

Profiling the human intestinal environment under physiological conditions

Dari Shalon, Rebecca N. Culver, Jessica A. Grembi, +18

Nature

Distinct Distal Gut Microbiome Diversity and Composition in Healthy Children from Bangladesh and the United States

Audrie Lin, Elisabeth M. Bik, Elizabeth K. Costello, +4

PLoS ONE

Correction: Exploring Microbial Diversity and Taxonomy Using SSU rRNA Hypervariable Tag Sequencing

Susan M. Huse, Les Dethlefsen, Julie A. Huber, +3

PLoS Genetics

Performance of the Translational Apparatus Varies with the Ecological Strategies of Bacteria

Les Dethlefsen, Thomas M. Schmidt

Journal of Bacteriology

BacteriologyMolecular BiologyMetabolic ModelProtein SynthesisBioenergetics +14

Multidomain analyses of a longitudinal human microbiome intestinal cleanout perturbation experiment

Julia Fukuyama, Laurie Rumker, Kris Sankaran, +4

PLoS Computational Biology

Community Recovery ProcessDysbiosisHost-microbe InteractionsHuman Microbial FloraDigestive Tract +18

COMPARISONS OF DISTANCE METHODS FOR COMBINING COVARIATES AND ABUNDANCES IN MICROBIOME STUDIES

Julia Fukuyama, Paul J. McMurdie, Les Dethlefsen, +2