Patrick Finzer

Emu: species-level microbial community profiling of full-length 16S rRNA Oxford Nanopore sequencing data

Kristen Curry, Qi Wang, Michael Nute et al. · Nature Methods · 2022 · 345 citations · Full text

Biology, Microbial Diversity, Microbial Systematics +10

Characterization of Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) Infection Clusters Based on Integrated Genomic Surveillance, Outbreak Analysis and Contact Tracing in an Urban Setting

Andreas Walker, Torsten Houwaart, Patrick Finzer et al. · Clinical Infectious Diseases · 2021 · 30 citations · Full text

Advancing Precision Vaccinology by Molecular and Genomic Surveillance of Severe Acute Respiratory Syndrome Coronavirus 2 in Germany, 2021

Djin Ye Oh, Martin Hölzer, Sofia Paraskevopoulou et al. · Clinical Infectious Diseases · 2022 · 25 citations · Full text

Emu: Species-Level Microbial Community Profiling for Full-Length Nanopore 16S Reads

Kristen Curry, Qi Wang, Michael Nute et al. · 2021 · 16 citations · Full text

Microbial Diversity, Microbial Systematics, Present Emu +15

Integrated genomic surveillance enables tracing of person-to-person SARS-CoV-2 transmission chains during community transmission and reveals extensive onward transmission of travel-imported infections, Germany, June to July 2021

Torsten Houwaart, Samir Belhaj, Emran Tawalbeh et al. · Eurosurveillance · 2022 · 12 citations · Full text