James T. Yurkovich

Creation and analysis of biochemical constraint-based models using the COBRA Toolbox v.3.0

Laurent Heirendt, Sylvain Arreckx, Thomas Pfau et al. · Nature Protocols · 2019 · 1.4K citations · Full text

Life Sciences, Bioinformatics, Systems Biology +12

Gut microbiome pattern reflects healthy ageing and predicts survival in humans

Tomasz Wilmanski, Christian Diener, Noa Rappaport et al. · Nature Metabolism · 2021 · 672 citations · Full text

Life Sciences, Geriatric Medicine, Microbiology +12

BiGG Models 2020: multi-strain genome-scale models and expansion across the phylogenetic tree

Charles J. Norsigian, Neha Pusarla, John Luke McConn et al. · Nucleic Acids Research · 2019 · 283 citations · Full text

Life Sciences, Bioinformatics, Biology +16

Metabolic Network Analysis Reveals Altered Bile Acid Synthesis and Metabolism in Alzheimer’s Disease

Priyanka Baloni, Cory C. Funk, Jingwen Yan et al. · Cell Reports Medicine · 2020 · 210 citations · Full text

Life Sciences, Biochemistry, Neuroscience +17

Machine learning and structural analysis of Mycobacterium tuberculosis pan-genome identifies genetic signatures of antibiotic resistance

Erol Kavvas, Edward Catoiu, Nathan Mih et al. · Nature Communications · 2018 · 186 citations · Full text

Life Sciences, Bioinformatics, Genetics +17