Pemra Doruker

Dynamics of proteins predicted by molecular dynamics simulations and analytical approaches: application to alpha-amylase inhibitor.

Pemra Doruker, İvet Bahar · PubMed · 2000 · 284 citations

Protein Chemistry, Biophysical Modeling, Engineering +15

Dynamics of proteins predicted by molecular dynamics simulations and analytical approaches: Application to ?-amylase inhibitor

Pemra Doruker, Ali Rana Atılgan, İvet Bahar · Proteins Structure Function and Bioinformatics · 2000 · 270 citations

Biophysical Modeling, Engineering, Computational Chemistry +20

Dynamics of large proteins through hierarchical levels of coarse‐grained structures

Pemra Doruker, Robert L. Jernigan, İvet Bahar · Journal of Computational Chemistry · 2001 · 229 citations

Elastic Network Models, Protein Assembly, Protein Folding +13

<i>ProDy</i> 2.0: increased scale and scope after 10 years of protein dynamics modelling with Python

She Zhang, James Krieger, Yan Zhang et al. · Bioinformatics · 2021 · 211 citations · Full text

Reverse Mapping of Coarse-Grained Polyethylene Chains from the Second Nearest Neighbor Diamond Lattice to an Atomistic Model in Continuous Space

Pemra Doruker, Wayne L. Mattice · Macromolecules · 1997 · 105 citations

Engineering, High Coordination Lattice, Material Simulation +21