FunPred-1: Protein function prediction from a protein interaction network using neighborhood analysis

Sovan Saha, Piyali Chatterjee, Subhadip Basu, +2

Cellular & Molecular Biology Letters

Protein function prediction from protein–protein interaction network using gene ontology based neighborhood analysis and physico-chemical features

Sovan Saha, Abhimanyu Prasad, Piyali Chatterjee, +2

Journal of Bioinformatics and Computational Biology

Molecular BiologyProtein Function PredictionProtein–protein Interaction NetworkBiostatisticsProteomics +17

Drug repurposing for COVID-19 using computational screening: Is Fostamatinib/R406 a potential candidate?

Sovan Saha, Anup Kumar Halder, Soumyendu Sekhar Bandyopadhyay, +4

Methods

Computational ScreeningPotential CandidateDrug RepositioningMedicineImmunology +7

Computational modeling of human-nCoV protein-protein interaction network

Sovan Saha, Anup Kumar Halder, Soumyendu Sekhar Bandyopadhyay, +3

Methods

EngineeringInteractomicsBiological NetworkComputational BiologyMolecular Biology +3

FunPred 3.0: improved protein function prediction using protein interaction network

Sovan Saha, Piyali Chatterjee, Subhadip Basu, +2

PeerJ

Protein function prediction from dynamic protein interaction network using gene expression data

Sovan Saha, Abhimanyu Prasad, Piyali Chatterjee, +2

Journal of Bioinformatics and Computational Biology

Improving prediction of protein function from protein interaction network using intelligent neighborhood approach

Sovan Saha, Piyali Chatterjee, Subhadip Basu, +2

Protein Interaction NetworkEngineeringInteraction NetworkMolecular BiologyNetwork Analysis +21

Is Fostamatinib a possible drug for COVID-19? – A computational study

Sovan Saha, Anup Kumar Halder, Soumyendu Sekhar Bandyopadhyay, +4

Viral DiagnosticsImmunologyPossible DrugPharmacotherapyCovid-19 Epidemiology +14

Detection of spreader nodes in human-SARS-CoV protein-protein interaction network

Sovan Saha, Piyali Chatterjee, Mita Nasipuri, +1

PeerJ

ML-DTD: Machine Learning-Based Drug Target Discovery for the Potential Treatment of COVID-19

Sovan Saha, Piyali Chatterjee, Anup Kumar Halder, +3

Vaccines

Drug TargetEngineeringHit IdentificationTarget IdentificationCovid-19 +15