Luis Mendoza

The ProteomeXchange consortium at 10 years: 2023 update

Eric W. Deutsch, Nuno Bandeira, Yasset Pérez‐Riverol et al. · Nucleic Acids Research · 2022 · 865 citations · Full text

Life Sciences, Biochemistry, Bioinformatics +13

iProphet: Multi-level Integrative Analysis of Shotgun Proteomic Data Improves Peptide and Protein Identification Rates and Error Estimates

David Shteynberg, Eric W. Deutsch, Henry Lam et al. · Molecular & Cellular Proteomics · 2011 · 619 citations · Full text

Life Sciences, Biochemistry, Bioinformatics +17

<scp>PASSEL</scp>: The <scp>P</scp>eptide<scp>A</scp>tlas <scp>SRM</scp>experiment library

Terry Farrah, Eric W. Deutsch, Richard Kreisberg et al. · PROTEOMICS · 2012 · 215 citations

Life Sciences, Biochemistry, Bioinformatics +10

PTMProphet: Fast and Accurate Mass Modification Localization for the Trans-Proteomic Pipeline

David Shteynberg, Eric W. Deutsch, David Campbell et al. · Journal of Proteome Research · 2019 · 160 citations

Life Sciences, Bioinformatics, Molecular Biology +17

Trans-Proteomic Pipeline: Robust Mass Spectrometry-Based Proteomics Data Analysis Suite

Eric W. Deutsch, Luis Mendoza, David Shteynberg et al. · Journal of Proteome Research · 2023 · 113 citations · Full text

Life Sciences, Bioinformatics, Cloud Computing +17