Soumyadeep Nandi

HMM-ModE – Improved classification using profile hidden Markov models by optimising the discrimination threshold and modifying emission probabilities with negative training sequences

Prashant Srivastava, Dhwani Desai, Soumyadeep Nandi et al. · BMC Bioinformatics · 2007 · 49 citations · Full text

Life Sciences, Bioinformatics, Biology +17

Comparison of theoretical proteomes: Identification of COGs with conserved and variable pI within the multimodal pI distribution

Soumyadeep Nandi, Nipun Mehra, Andrew M. Lynn et al. · BMC Genomics · 2005 · 43 citations · Full text

Life Sciences, Biology, Microbiology +16

A genome-wide steroid response study of the major human fungal pathogen Candida albicans

Dibyendu Banerjee, Nuria San Martín, Soumyadeep Nandi et al. · Mycopathologia · 2007 · 40 citations

Life Sciences, Immunology, Microbiology +12

Discovery, optimization and validation of an optimal DNA-binding sequence for the Six1 homeodomain transcription factor

Yubing Liu, Soumyadeep Nandi, A. R. Martel et al. · Nucleic Acids Research · 2012 · 27 citations · Full text

Life Sciences, Developmental Biology, Molecular Biology +15

Alignment-free method for DNA sequence clustering using Fuzzy integral similarity

Ajay Kumar Saw, Garima Raj, Manashi Das et al. · Scientific Reports · 2019 · 27 citations · Full text

Life Sciences, Bioinformatics, Microbiology +17