Pegah Tootoonchi Afshar

A universal SNP and small-indel variant caller using deep neural networks

Ryan Poplin, Pi-Chuan Chang, David H. Alexander et al. · Nature Biotechnology · 2018 · 1.9K citations

Life Sciences, Bioinformatics, Genetics +14

Gaining comprehensive biological insight into the transcriptome by performing a broad-spectrum RNA-seq analysis

Sayed Mohammad Ebrahim Sahraeian, Marghoob Mohiyuddin, Robert Sebra et al. · Nature Communications · 2017 · 406 citations · Full text

Life Sciences, Biology, Molecular Biology +17

Characterization of the human ESC transcriptome by hybrid sequencing

Kin Fai Au, Vittorio Sebastiano, Pegah Tootoonchi Afshar et al. · Proceedings of the National Academy of Sciences · 2013 · 388 citations · Full text

Life Sciences, Cell Biology, Molecular Biology +16

An ensemble approach to accurately detect somatic mutations using SomaticSeq

Li Tai Fang, Pegah Tootoonchi Afshar, Aparna Chhibber et al. · Genome biology · 2015 · 156 citations · Full text

Life Sciences, Bioinformatics, Genetics +17

Characterization of fusion genes and the significantly expressed fusion isoforms in breast cancer by hybrid sequencing

Jason L. Weirather, Pegah Tootoonchi Afshar, Tyson A. Clark et al. · Nucleic Acids Research · 2015 · 128 citations · Full text

Life Sciences, Molecular Biology, Oncology +17