Multi-site assessment of the precision and reproducibility of multiple reaction monitoring–based measurements of proteins in plasma

Terri A. Addona, Susan E. Abbatiello, Birgit Schilling, +46

Nature Biotechnology

BiochemistryMulti-site AssessmentMedicineBioanalysisMass Spectrometry +11

Targeted Peptide Measurements in Biology and Medicine: Best Practices for Mass Spectrometry-based Assay Development Using a Fit-for-Purpose Approach

Steven A. Carr, Susan E. Abbatiello, Bradley L. Ackermann, +42

Molecular & Cellular Proteomics

Comprehensive Single-Shot Proteomics with FAIMS on a Hybrid Orbitrap Mass Spectrometer

Alexander S. Hebert, Satendra Prasad, Michael W. Belford, +9

Analytical Chemistry

Ion Mobility SpectrometryProteomic TechnologyBottom-up Proteomics ExperimentsBioanalysisAnalytical Chemistry +14

Effect of Collision Energy Optimization on the Measurement of Peptides by Selected Reaction Monitoring (SRM) Mass Spectrometry

Brendan MacLean, Daniela M. Tomazela, Susan E. Abbatiello, +5

Analytical Chemistry

Multiple Reaction MonitoringSpectrochemical AnalysisProteomic TechnologyAnalytical ChemistryProteomics +17

Characterization and Optimization of Multiplexed Quantitative Analyses Using High-Field Asymmetric-Waveform Ion Mobility Mass Spectrometry

Devin K. Schweppe, Satendra Prasad, Michael W. Belford, +12

Analytical Chemistry

Automated Detection of Inaccurate and Imprecise Transitions in Peptide Quantification by Multiple Reaction Monitoring Mass Spectrometry

Susan E. Abbatiello, D.R. Mani, Hasmik Keshishian, +1

Clinical Chemistry

Demonstrating the feasibility of large-scale development of standardized assays to quantify human proteins

Jacob J. Kennedy, Susan E. Abbatiello, Kyunggon Kim, +18

Nature Methods

Proteomic TechnologyMedicineNatural SciencesBioanalysisProtein Analysis +11

The Blood Proteoform Atlas: A reference map of proteoforms in human hematopoietic cells

Rafael D. Melani, Vincent R. Gerbasi, Lissa C. Anderson, +23

Science

EngineeringImmunologyBlood CellPathologyReference Map +18

Evaluation of Large Scale Quantitative Proteomic Assay Development Using Peptide Affinity-based Mass Spectrometry

Jeffrey R. Whiteaker, Lei Zhao, Susan E. Abbatiello, +9

Molecular & Cellular Proteomics

Siscapa AssaysImmunologyBiological Mass SpectrometryImmunodominanceStable Isotope Standards +19

Statistical characterization of multiple-reaction monitoring mass spectrometry (MRM-MS) assays for quantitative proteomics

D.R. Mani, Susan E. Abbatiello, Steven A. Carr

BMC Bioinformatics