Alejandro Chacón

From Wet‐Lab to Variations: Concordance and Speed of Bioinformatics Pipelines for Whole Genome and Whole Exome Sequencing

Steven Laurie, Marcos Fernández-Callejo, Santiago Marco‐Sola et al. · Human Mutation · 2016 · 64 citations · Full text

Life Sciences, Bioinformatics, Genetics +17

n-step FM-Index for Faster Pattern Matching

Alejandro Chacón, Juan Carlos Moure, Antonio Espinosa et al. · Procedia Computer Science · 2013 · 40 citations · Full text

Computing, Bioinformatics, Computer Science +17

Thread-cooperative, bit-parallel computation of levenshtein distance on GPU

Alejandro Chacón, Santiago Marco‐Sola, Antonio Espinosa et al. · 2014 · 39 citations · Full text

Computing, Computer Science, High-performance Computing +17

GPU-accelerated homology search with MMseqs2

Felix Kallenborn, Alejandro Chacón, Christian Hundt et al. · Nature Methods · 2025 · 36 citations · Full text

Life Sciences, Bioinformatics, High-performance Computing +15

Boosting the FM-Index on the GPU: Effective Techniques to Mitigate Random Memory Access

Alejandro Chacón, Santiago Marco‐Sola, Antonio Espinosa et al. · IEEE/ACM Transactions on Computational Biology and Bioinformatics · 2014 · 30 citations · Full text

Life Sciences, Bioinformatics, High-performance Computing +17