Alla D. Fedorova

HOCOMOCO: towards a complete collection of transcription factor binding models for human and mouse via large-scale ChIP-Seq analysis

Ivan V. Kulakovskiy, Ilya E. Vorontsov, Ivan Yevshin et al. · Nucleic Acids Research · 2017 · 1.1K citations · Full text

Life Sciences, Bioinformatics, Molecular Biology +16

Exploring the pre-immune landscape of antigen-specific T cells

Mikhail V. Pogorelyy, Alla D. Fedorova, James E. McLaren et al. · Genome Medicine · 2018 · 52 citations · Full text

Life Sciences, Cell Biology, Immunology +17

Evolution of naturally arising SARS-CoV-2 defective interfering particles

Samer Girgis, Zaikun Xu, Spyros Oikonomopoulos et al. · Communications Biology · 2022 · 47 citations · Full text

Life Sciences, Infectious Diseases, Molecular Biology +15

Genome-wide map of human and mouse transcription factor binding sites aggregated from ChIP-Seq data

Ilya E. Vorontsov, Alla D. Fedorova, Ivan Yevshin et al. · BMC Research Notes · 2018 · 30 citations · Full text

Life Sciences, Genetics, Molecular Biology +17

Thousands of human non-AUG extended proteoforms lack evidence of evolutionary selection among mammals

Alla D. Fedorova, Stephen J. Kiniry, Dmitry E. Andreev et al. · Nature Communications · 2022 · 28 citations · Full text

Life Sciences, Bioinformatics, Molecular Biology +13