José A. Dianes

2016 update of the PRIDE database and its related tools

Juan Antonio Vizcaíno, Attila Csordás, Noemí del‐Toro et al. · Nucleic Acids Research · 2015 · 3.6K citations · Full text

Engineering, Molecular Biology, Bioinformatics Database +18

The Proteomics Identifications (PRIDE) database and associated tools: status in 2013

Juan Antonio Vizcaíno, Richard G. Côté, Attila Csordás et al. · Nucleic Acids Research · 2012 · 1.9K citations · Full text

Biological Mass Spectrometry, Molecular Biology, Genomics +20

PRIDE Inspector Toolsuite: Moving Toward a Universal Visualization Tool for Proteomics Data Standard Formats and Quality Assessment of ProteomeXchange Datasets

Yasset Pérez‐Riverol, Qing-Wei Xu, Rui Wang et al. · Molecular & Cellular Proteomics · 2015 · 213 citations · Full text

Recognizing millions of consistently unidentified spectra across hundreds of shotgun proteomics datasets

Johannes Griss, Yasset Pérez‐Riverol, Steve Lewis et al. · Nature Methods · 2016 · 192 citations · Full text

Proteomic Technology, Functional Genomics, Engineering +12

The PRoteomics IDEntification (PRIDE) Converter 2 Framework: An Improved Suite of Tools to Facilitate Data Submission to the PRIDE Database and the ProteomeXchange Consortium

Richard G. Côté, Johannes Griss, José A. Dianes et al. · Molecular & Cellular Proteomics · 2012 · 113 citations · Full text

Engineering, Data Preparation, Software Engineering +23