Ronan M. T. Fleming

Quantitative prediction of cellular metabolism with constraint-based models: the COBRA Toolbox v2.0

Jan Schellenberger, Richard Que, Ronan M. T. Fleming et al. · Nature Protocols · 2011 · 1.9K citations · Full text

Metabolic Network, Systems Biology, Engineering +13

Creation and analysis of biochemical constraint-based models using the COBRA Toolbox v.3.0

Laurent Heirendt, Sylvain Arreckx, Thomas Pfau et al. · Nature Protocols · 2019 · 1.3K citations · Full text

Metabolic Network, Engineering, Biochemistry +12

A community-driven global reconstruction of human metabolism

Ines Thiele, Neil Swainston, Ronan M. T. Fleming et al. · Nature Biotechnology · 2013 · 1K citations · Full text

Metabolic Network, Metabolism, Metabolomics +4

Generation of genome-scale metabolic reconstructions for 773 members of the human gut microbiota

Stefanía Magnúsdóttir, Almut Heinken, Laura Kutt et al. · Nature Biotechnology · 2016 · 839 citations · Full text

Biology, Metabolic Network, Dysbiosis +14

Recon3D enables a three-dimensional view of gene variation in human metabolism

Elizabeth Brunk, Swagatika Sahoo, Daniel C. Zielinski et al. · Nature Biotechnology · 2018 · 787 citations · Full text

Metabolic Network, Functional Genomics, Metabolic Model +15