OpenProt: a more comprehensive guide to explore eukaryotic coding potential and proteomes

Marie A. Brunet, Mylène Brunelle, Jean‐François Lucier, +13

Nucleic Acids Research

GeneticsMolecular BiologyGenomicsBioinformatics DatabaseProteomic Technology +18

Deep transcriptome annotation enables the discovery and functional characterization of cryptic small proteins

Sondos Samandi, Annie V. Roy, Vivian Delcourt, +16

eLife

GeneticsMolecular BiologyTranscriptomics TechnologyGenomicsDeep Transcriptome Annotation +21

The Protein Coded by a Short Open Reading Frame, Not by the Annotated Coding Sequence, Is the Main Gene Product of the Dual-Coding Gene MIEF1

Vivian Delcourt, Mylène Brunelle, Annie V. Roy, +4

Molecular & Cellular Proteomics

Combined Mass Spectrometry Imaging and Top-down Microproteomics Reveals Evidence of a Hidden Proteome in Ovarian Cancer

Vivian Delcourt, Julien Franck, Éric Leblanc, +10

EBioMedicine

Spatially-Resolved Top-down Proteomics Bridged to MALDI MS Imaging Reveals the Molecular Physiome of Brain Regions

Vivian Delcourt, Julien Franck, Jusal Quanico, +7

Molecular & Cellular Proteomics

Optimized Sample Preparation Workflow for Improved Identification of Ghost Proteins

Tristan Cardon, Flore Hervé, Vivian Delcourt, +4

Analytical Chemistry

Structural BioinformaticsMolecular BiologyProtein PurificationProteomic TechnologyProtein Folding +20

From a non‐targeted metabolomics approach to a targeted biomarkers strategy to highlight testosterone abuse in equine. Illustration of a methodological transfer between platforms and laboratories

Chloé Cloteau, Gaud Dervilly, Zied Kaabia, +10

Drug Testing and Analysis

Metabolomic ProfilingGynecologyReproductive BiologyPotential BiomarkersTargeted Biomarkers Strategy +22

Experimental design approach to the optimisation of hydrocarbons extraction from the sediment: Method development and application

Sopheak Net, David Dumoulin, R. El-Osmani, +3

Applied Geochemistry

Solvent ExtractionProcess DesignEnvironmental ChemistryPetroleum EngineeringEngineering +12

MetIDfyR: An Open-Source R Package to Decipher Small-Molecule Drug Metabolism through High-Resolution Mass Spectrometry

Vivian Delcourt, Agnès Barnabé, Benoît Loup, +7

Analytical Chemistry

Drug TargetHit IdentificationComplex MixturesMetabolomic ProfilingToxicology Laboratories +18

miRNAs detection in equine plasma by quantitative polymerase chain reaction for doping control: Assessment of blood sampling and study of eca‐miR‐144 as potential erythropoiesis stimulating agent biomarker

Benoît Loup, François André, Justine Avignon, +6

Drug Testing and Analysis

Equine PlasmaEngineeringImmunologyPathologyPotential Biomarkers +15