Mazen Ahmad

A geometric deep learning approach to predict binding conformations of bioactive molecules

Oscar Méndez‐Lucio, Mazen Ahmad, Ehecatl Antonio del Rio‐Chanona et al. · Nature Machine Intelligence · 2021 · 170 citations

Geometric Deep, Bioactive Molecules, Protein Folding +9

Adhesive water networks facilitate binding of protein interfaces

Mazen Ahmad, Wei Gu, Tihamér Geyer et al. · Nature Communications · 2011 · 161 citations · Full text

Protein Assembly, Protein Folding, Cell Adhesion +6

Interaction of calmodulin with Sec61α limits Ca2+ leakage from the endoplasmic reticulum

Frank Erdmann, Nico Schäuble, Sven Lang et al. · The EMBO Journal · 2010 · 101 citations · Full text

Mechanism of Fast Peptide Recognition by SH3 Domains

Mazen Ahmad, Wei Gu, Volkhard Helms · Angewandte Chemie International Edition · 2008 · 95 citations

Molecular Docking, Bimodal Binding Mechanism, Protein Assembly +14

Enthalpy–Entropy Compensation upon Molecular Conformational Changes

Mazen Ahmad, Volkhard Helms, Thomas Lengauer et al. · Journal of Chemical Theory and Computation · 2015 · 36 citations

Free Energy, Engineering, Enthalpy–entropy Compensation +16