Optimising droplet digital PCR analysis approaches for detection and quantification of bacteria: a case study of fire blight and potato brown rot

T. Dreo, M. Pirc, Živa Ramšak, +4

Analytical and Bioanalytical Chemistry

Pathogen DetectionCase StudyPotato Brown RotPlant PathologyBiostatistics +4

Enabling reusability of plant phenomic datasets with MIAPPE 1.1

Evangelia Papoutsoglou, Daniel Faria, Daniel Arend, +34

New Phytologist

Miappe 1.1Plant AnalysisEngineeringBotanyData Publishing +15

GoMapMan: integration, consolidation and visualization of plant gene annotations within the MapMan ontology

Živa Ramšak, Špela Baebler, Ana Rotter, +4

Nucleic Acids Research

Ontology (Information Science)Plant GeneticsMapman OntologyEngineeringBotany +21

Assessment of toxicity and genotoxicity of low doses of 5-fluorouracil in zebrafish ( Danio rerio ) two-generation study

Róbert Kovács, Zsolt Csenki, Katalin Bakos, +17

Water Research

MedicineToxicology TestingToxicologyDanio RerioLow Doses +7

PaintOmics 4: new tools for the integrative analysis of multi-omics datasets supported by multiple pathway databases

Tianyuan Liu, Pedro Salguero, Marko Petek, +7

Nucleic Acids Research

GeneticsMetabolomic ProfilingMultiomicsGenomicsIntegrative Analysis +24

Physiological and Proteomic Signatures Reveal Mechanisms of Superior Drought Resilience in Pearl Millet Compared to Wheat

Arindam Ghatak, Palak Chaturvedi, Gert Bachmann, +10

Frontiers in Plant Science

Plant GeneticsBotanyGeneticsLarge Scale ProteomicsGenomics +17

Heterogeneous glioblastoma cell cross-talk promotes phenotype alterations and enhanced drug resistance

Helena Motaln, Ana Koren, Kristina Gruden, +3

Oncotarget

Cell ProliferationHigh-grade GliomasCancer BiologyGliomaTumor Biology +14

System level analysis of cacao seed ripening reveals a sequential interplay of primary and secondary metabolism leading to polyphenol accumulation and preparation of stress resistance

Lei Wang, Thomas Nägele, Hannes Doerfler, +10

The Plant Journal

Cacao AromaCacao SeedBotanyCacao SeedsRipening +15

Bimodal dynamics of primary metabolism-related responses in tolerant potato-Potato virus Y interaction

Tjaša Stare, Živa Ramšak, Andrej Blejec, +6

BMC Genomics

Salicylic Acid Perturbs sRNA-Gibberellin Regulatory Network in Immune Response of Potato to Potato virus Y Infection

Maja Križnik, Marko Petek, David Dobnik, +6

Frontiers in Plant Science