Peter K. Koo

The tethering of chromatin to the nuclear envelope supports nuclear mechanics

Sarah M. Schreiner, Peter K. Koo, Yao Zhao et al. · Nature Communications · 2015 · 256 citations · Full text

Representation learning of genomic sequence motifs with convolutional neural networks

Peter K. Koo, Sean R. Eddy · PLoS Computational Biology · 2019 · 126 citations · Full text

A demonstration of unsupervised machine learning in species delimitation

Shahan Derkarabetian, Stephanie Castillo, Peter K. Koo et al. · Molecular Phylogenetics and Evolution · 2019 · 118 citations

Animal Taxonomy, Biodiversity, Molecular Ecology +3

Global importance analysis: An interpretability method to quantify importance of genomic features in deep neural networks

Peter K. Koo, Antonio Majdandzic, Matthew Ploenzke et al. · PLoS Computational Biology · 2021 · 91 citations · Full text

Improving representations of genomic sequence motifs in convolutional networks with exponential activations

Peter K. Koo, Matt Ploenzke · Nature Machine Intelligence · 2021 · 84 citations · Full text

Genomic Sequence Motifs, Sequence Motif, Graph Neural Network +13