Cortical representations of olfactory input by trans-synaptic tracing

Kazunari Miyamichi, Fernando Amat, Farshid Moussavi, +10

Nature

Neurobiological MechanismNeural MechanismComputational NeuroscienceCortical RepresentationsNeuroscience +2

Dynamic blastomere behaviour reflects human embryo ploidy by the four-cell stage

Shawn L. Chavez, Kevin Loewke, Jinnuo Han, +5

Nature Communications

CytogeneticsGeneticsCell CycleFour-cell StageReproductive Biology +20

Markov random field based automatic image alignment for electron tomography

Fernando Amat, Farshid Moussavi, Luis R. Comolli, +3

Journal of Structural Biology

Image ReconstructionImage AnalysisEngineeringMedical ImagingMicroscopy +10

Peptidoglycan Remodeling and Conversion of an Inner Membrane into an Outer Membrane during Sporulation

Elitza I. Tocheva, Eric G. Matson, Dylan M. Morris, +3

Cell

Membrane StructureMembrane FormationMembrane BiophysicsInner MembraneOuter Membrane +7

Alignment of Cryo-Electron Tomography Datasets

Fernando Amat, Daniel Castaño‐Díez, Albert F. Lawrence, +3

Methods in enzymology on CD-ROM/Methods in enzymology

Electron MicroscopyMedical ImagingMicroscopyBiomedical ImagingElectron Microscope +4

Analysis of the Intact Surface Layer of<i>Caulobacter crescentus</i>by Cryo-Electron Tomography

Fernando Amat, Luis R. Comolli, John F. Nomellini, +4

Journal of Bacteriology

Subtomogram alignment by adaptive Fourier coefficient thresholding

Fernando Amat, Luis R. Comolli, Farshid Moussavi, +3

Journal of Structural Biology

Image AnalysisEngineeringMathematical MorphologyMicroscopyMicroscope Image Processing +3

3D segmentation of cell boundaries from whole cell cryogenic electron tomography volumes

Farshid Moussavi, Geremy Heitz, Fernando Amat, +3

Journal of Structural Biology

EngineeringElectron MicroscopyMedical ImagingMicroscopyBioimage Analysis +9

Automated Embryo Stage Classification in Time-Lapse Microscopy Video of Early Human Embryo Development

Yu Wang, Farshid Moussavi, Peter Lorenzen

Lecture notes in computer science

Developmental BiologyImage AnalysisEngineeringMicroscopyMicroscope Image Processing +11

A Unified Graphical Models Framework for Automated Mitosis Detection in Human Embryos

Farshid Moussavi, Yu Wang, Peter Lorenzen, +3

IEEE Transactions on Medical Imaging

EngineeringMachine LearningDigital PathologyEmbryologyImage Sequence Analysis +27