Samuel L. Neff

GAUGE-Annotated Microbial Transcriptomic Data Facilitate Parallel Mining and High-Throughput Reanalysis To Form Data-Driven Hypotheses

Zhongyou Li, Katja Koeppen, Victoria Holden et al. · mSystems · 2021 · 18 citations · Full text

Life Sciences, Biology, Microbiology +12

CF-Seq, an accessible web application for rapid re-analysis of cystic fibrosis pathogen RNA sequencing studies

Samuel L. Neff, Thomas H. Hampton, Charles Puerner et al. · Scientific Data · 2022 · 12 citations · Full text

Life Sciences, Bioinformatics, Molecular Biology +12

Compendium-Wide Analysis of Pseudomonas aeruginosa Core and Accessory Genes Reveals Transcriptional Patterns across Strains PAO1 and PA14

Alexandra Lee, Georgia Doing, Samuel L. Neff et al. · mSystems · 2022 · 10 citations · Full text

Life Sciences, Microbiology, Molecular Biology +13

<i>Pseudomonas aeruginosa</i> transcriptome analysis of metal restriction in <i>ex vivo</i> cystic fibrosis sputum

Samuel L. Neff, Georgia Doing, Taylor Reiter et al. · Microbiology Spectrum · 2024 · 10 citations · Full text

Life Sciences, Microbiology, Molecular Biology +15

Language model-guided anticipation and discovery of mammalian metabolites

Hantao Qiang, Fei Wang, Wenyun Lu et al. · Nature · 2026 · 10 citations · Full text

Life Sciences, Biochemistry, Bioinformatics +14