Lee Ann McCue

FQC Dashboard: integrates FastQC results into a web-based, interactive, and extensible FASTQ quality control tool

Joseph Brown, Meg Pirrung, Lee Ann McCue · Bioinformatics · 2017 · 1.2K citations · Full text

Computing, Bioinformatics, Computer Science +11

Phylogenetic footprinting of transcription factor binding sites in proteobacterial genomes

Lee Ann McCue · Nucleic Acids Research · 2001 · 255 citations · Full text

Life Sciences, Bioinformatics, Microbiology +16

Genomes and secretomes of Ascomycota fungi reveal diverse functions in plant biomass decomposition and pathogenesis

Jean F. Challacombe, Cedar Hesse, Lisa Bramer et al. · BMC Genomics · 2019 · 253 citations · Full text

Life Sciences, Botany, Plant Sciences +17

ATLAS: a Snakemake workflow for assembly, annotation, and genomic binning of metagenome sequence data

Silas Kieser, Joseph Brown, Evgeny M. Zdobnov et al. · BMC Bioinformatics · 2020 · 205 citations · Full text

Life Sciences, Bioinformatics, Microbiology +17

Soil texture and environmental conditions influence the biogeochemical responses of soils to drought and flooding

Kaizad Patel, Sarah Fansler, Tayte Campbell et al. · Communications Earth & Environment · 2021 · 154 citations · Full text

Agriculture, Hydrology, Soil Sciences +17