dbAMP 2.0: updated resource for antimicrobial peptides with an enhanced scanning method for genomic and proteomic data

Jhih-Hua Jhong, Lantian Yao, Yuxuan Pang, +21

Nucleic Acids Research

Peptide EngineeringAntimicrobial PeptidesBioanalysisProteomicsAntimicrobial Resistance +16

dbPTM in 2022: an updated database for exploring regulatory networks and functional associations of protein post-translational modifications

Zhongyan Li, Shangfu Li, Mengqi Luo, +19

Nucleic Acids Research

Functional AssociationsGeneticsMolecular BiologyGene Regulatory NetworkProteomics +19

Removal and reductive dechlorination of triclosan by Chlorella pyrenoidosa

Shujuan Wang, Xian Wang, Karen Poon, +5

Chemosphere

Environmental ChemistryEngineeringDecontaminationEnvironmental EngineeringBioremediation +5

UbiNet 2.0: a verified, classified, annotated and updated database of E3 ubiquitin ligase–substrate interactions

Zhongyan Li, Siyu Chen, Jhih-Hua Jhong, +4

Database

Metabolomics study of alcohol-induced liver injury and hepatocellular carcinoma xenografts in mice

Shangfu Li, Hongxia Liu, Yibao Jin, +3

Journal of Chromatography B

Alcohol-induced Liver InjuryHepatocellular Carcinoma XenograftsHepatologyMedicineLiver Physiology +11

Comprehensive Analysis of Acylcarnitine Species in <i>db/db</i> Mouse Using a Novel Method of High-Resolution Parallel Reaction Monitoring Reveals Widespread Metabolic Dysfunction Induced by Diabetes

Li Xiang, Juntong Wei, Xiao Yu Tian, +12

Analytical Chemistry

Metabolomic ProfilingMetabolic SyndromeAcylcarnitine SpeciesBioanalysisComprehensive Analysis +18

Metabolomics studies on db/db diabetic mice in skeletal muscle reveal effective clearance of overloaded intermediates by exercise

Li Xiang, Hongsong Zhang, Juntong Wei, +9

Analytica Chimica Acta

Metabolic SyndromeMetabolomics StudiesMuscle FunctionKinesiologyBiochemistry +11

A large-scale investigation and identification of methicillin-resistant<i>Staphylococcus aureus</i>based on peaks binning of matrix-assisted laser desorption ionization-time of flight MS spectra

Hsin‐Yao Wang, Chia‐Ru Chung, Zhuo Wang, +5

Briefings in Bioinformatics

Pathogen DetectionMssa IsolatesBin SizeSpectrochemical AnalysisAnalytical Instrumentation +15

KinasePhos 3.0: Redesign and Expansion of the Prediction on Kinase-Specific Phosphorylation Sites

Renfei Ma, Shangfu Li, Wenshuo Li, +3

Genomics Proteomics & Bioinformatics

GeneticsMolecular BiologyKinase ClassificationSignaling PathwayReceptor Tyrosine Kinase +20

Simultaneous quantitation of hydrazine and acetylhydrazine in human plasma by high performance liquid chromatography-tandem mass spectrometry after derivatization with p -tolualdehyde

Lu Song, Dan Gao, Shangfu Li, +3

Journal of Chromatography B

BiochemistryGas ChromatographyMedicineChromatography-tandem Mass SpectrometryMass Spectrometry +9