Integrating de novo and inherited variants in 42,607 autism cases identifies mutations in new moderate-risk genes

Xueya Zhou, Pamela Feliciano, Chang Shu, +418

Nature Genetics

Diarrhea in young children from low-income countries leads to large-scale alterations in intestinal microbiota composition

Mihai Pop, Alan W. Walker, Joseph N. Paulson, +32

Genome biology

Exome sequencing of 457 autism families recruited online provides evidence for autism risk genes

Pamela Feliciano, Xueya Zhou, Irina Astrovskaya, +217

npj Genomic Medicine

MetAMOS: a modular and open source metagenomic assembly and analysis pipeline

Todd J. Treangen, Sergey Koren, Doron D. Sommer, +5

Genome biology

Large-scale targeted sequencing identifies risk genes for neurodevelopmental disorders

Tianyun Wang, Kendra Hoekzema, Davide Vecchio, +232

Nature Communications

GeneticsMost GenesDisease Gene IdentificationGenomicsNdd Cases +17

Recent ultra-rare inherited variants implicate new autism candidate risk genes

Amy B. Wilfert, Tychele N. Turner, Shwetha C. Murali, +40

Nature Genetics

Syndromic AutismGenetic DisorderGeneticsPsychiatric GeneticsFragile X Spectrum +6

Inferring viral quasispecies spectra from 454 pyrosequencing reads

Irina Astrovskaya, Bassam Tork, Serghei Mangul, +4

BMC Bioinformatics

Integrated gene analyses of de novo variants from 46,612 trios with autism and developmental disorders

Tianyun Wang, Chang N. Kim, Trygve E. Bakken, +169

Proceedings of the National Academy of Sciences

Individual-specific changes in the human gut microbiota after challenge with enterotoxigenic Escherichia coli and subsequent ciprofloxacin treatment

Mihai Pop, Joseph N. Paulson, Subhra Chakraborty, +10

BMC Genomics

De novo likelihood-based measures for comparing genome assemblies

Mohammadreza Ghodsi, C. Hill, Irina Astrovskaya, +4

BMC Research Notes