Camille Marchet

Critical Assessment of Metagenome Interpretation: the second round of challenges

Fernando Meyer, Adrian Fritz, Zhi-Luo Deng et al. · Nature Methods · 2022 · 366 citations · Full text

SNP calling from RNA-seq data without a reference genome: identification, quantification, differential analysis and impact on the protein sequence

Hélène Lopez-Maestre, Lilia Brinza, Camille Marchet et al. · Nucleic Acids Research · 2016 · 87 citations · Full text

Genetics, Genetic Epidemiology, Molecular Biology +22

Scalable long read self-correction and assembly polishing with multiple sequence alignment

Pierre Morisse, Camille Marchet, Antoine Limasset et al. · Scientific Reports · 2021 · 78 citations · Full text

REINDEER: efficient indexing of <i>k</i> -mer presence and abundance in sequencing datasets

Camille Marchet, Zamin Iqbal, Daniel Gautheret et al. · Bioinformatics · 2020 · 68 citations · Full text

A de novo approach to disentangle partner identity and function in holobiont systems

Arnaud Meng, Camille Marchet, Erwan Corre et al. · Microbiome · 2018 · 55 citations · Full text