Katrine Joensen

Real-Time Whole-Genome Sequencing for Routine Typing, Surveillance, and Outbreak Detection of Verotoxigenic Escherichia coli

Katrine Joensen, Flemming Scheutz, Ole Lund et al. · Journal of Clinical Microbiology · 2014 · 1.4K citations · Full text

Pathogen Detection, Molecular Epidemiology, High Throughput Sequencing +21

Rapid and Easy<i>In Silico</i>Serotyping of Escherichia coli Isolates by Use of Whole-Genome Sequencing Data

Katrine Joensen, Anna Maria Malberg Tetzschner, Atsushi Iguchi et al. · Journal of Clinical Microbiology · 2015 · 866 citations · Full text

Pathogen Detection, Molecular Epidemiology, Escherichia Coli Isolates +22

PointFinder: a novel web tool for WGS-based detection of antimicrobial resistance associated with chromosomal point mutations in bacterial pathogens

Ea Zankari, Rosa Lundbye Allesøe, Katrine Joensen et al. · Journal of Antimicrobial Chemotherapy · 2017 · 766 citations · Full text

Applying the ResFinder and VirulenceFinder web-services for easy identification of acquired antibiotic resistance and<i>E. coli</i>virulence genes in bacteriophage and prophage nucleotide sequences

Kortine Kleinheinz, Katrine Joensen, Mette Voldby Larsen · Bacteriophage · 2014 · 324 citations · Full text

Microbial Pathogens, Genetics, Bacteriophage +22

Redefining enteroaggregative Escherichia coli (EAEC): Genomic characterization of epidemiological EAEC strains

Nadia Boisen, Mark T. Østerlund, Katrine Joensen et al. · PLoS neglected tropical diseases · 2020 · 81 citations · Full text

Genomic Characterization, E. Coli, Antimicrobial Resistance Gene +14