An atlas of human long non-coding RNAs with accurate 5′ ends

Chung-Chau Hon, Jordan A. Ramilowski, Jayson Harshbarger, +35

Nature

Accurate 5′Natural SciencesGeneticsRna BiologyMolecular Biology +7

Gateways to the FANTOM5 promoter level mammalian expression atlas

Marina Lizio, Jayson Harshbarger, Hisashi Shimoji, +36

Genome Biology

Transcribed enhancers lead waves of coordinated transcription in transitioning mammalian cells

Carsten O. Daub, Kristoffer Vitting‐Seerup, Robin Andersson, +105

Science

ChromatinTranscriptional RegulationSystems BiologyDevelopmental BiologyFunctional Genomics +13

An integrated expression atlas of miRNAs and their promoters in human and mouse

Derek de Rie, Imad Abugessaisa, Tanvir Alam, +66

Nature Biotechnology

Functional GenomicsGeneticsRna BiologyIntegrated Expression AtlasMicrorna Detection +6

FANTOM5 CAGE profiles of human and mouse samples

Shuhei Noguchi, Takahiro Arakawa, Shiro Fukuda, +174

Scientific Data

Update of the FANTOM web resource: expansion to provide additional transcriptome atlases

Marina Lizio, Imad Abugessaisa, Shuhei Noguchi, +10

Nucleic Acids Research

Cage DataGeneticsTranscriptomics TechnologyGenomicsBioinformatics Database +18

Functional annotation of human long noncoding RNAs via molecular phenotyping

Jordan A. Ramilowski, Chi Wai Yip, Saumya Agrawal, +112

Genome Research

refTSS: A Reference Data Set for Human and Mouse Transcription Start Sites

Imad Abugessaisa, Shuhei Noguchi, Akira Hasegawa, +4

Journal of Molecular Biology

EngineeringGeneticsTranscriptomics TechnologyGene Regulatory NetworkGenomics +17

Update of the FANTOM web resource: high resolution transcriptome of diverse cell types in mammals

Marina Lizio, Jayson Harshbarger, Imad Abugessaisa, +22

Nucleic Acids Research

EngineeringGeneticsTranscriptomics TechnologyGenomicsBioinformatics Database +21

FANTOM enters 20th year: expansion of transcriptomic atlases and functional annotation of non-coding RNAs

Imad Abugessaisa, Jordan A. Ramilowski, Marina Lizio, +25

Nucleic Acids Research

Fantom Enters 20ThGeneticsTranscriptomics TechnologyGenomicsEpigenetics +18