Episodic radiations in the fly tree of life

Brian M. Wiegmann, Michelle Trautwein, Isaac S. Winkler, +24

Proceedings of the National Academy of Sciences

Mashtree: a rapid comparison of whole genome sequence files

Lee S. Katz, Taylor Griswold, Shatavia S. Morrison, +5

The Journal of Open Source Software

NeXML: Rich, Extensible, and Verifiable Representation of Comparative Data and Metadata

Rutger Vos, James P. Balhoff, Jason Caravas, +8

Systematic Biology

Phototransduction and clock gene expression in the troglobiont beetle<i>Ptomaphagus hirtus</i>of Mammoth cave

Markus Friedrich, Rui Chen, Bryce Daines, +5

Journal of Experimental Biology

The core transcriptome of mammalian placentas and the divergence of expression with placental shape

Don Armstrong, Michael R. McGowen, Amy Weckle, +10

Placenta

Placental ShapeCell LineageMammalian PlacentasDevelopmental BiologyPlacental Development +10

Dramatic Expansion and Developmental Expression Diversification of the <b><i><scp>M</scp></i></b><i>ethuselah</i> Gene Family During Recent <b><i><scp>D</scp></i></b><i>rosophila</i> Evolution

Meghna Patel, DANA A. HALLAL, Jeffery W. Jones, +6

Journal of Experimental Zoology Part B Molecular and Developmental Evolution

Comprehensive bioinformatics analysis of Mycoplasma pneumoniae genomes to investigate underlying population structure and type-specific determinants

Maureen H. Diaz, Heta P. Desai, Shatavia S. Morrison, +6

PLoS ONE

GeneticsMycoplasma PneumoniaeGenetic EpidemiologyGenomicsHigh Throughput Sequencing +14

Evidence of a Conserved Molecular Response to Selection for Increased Brain Size in Primates

Amy M. Boddy, Peter W. Harrison, Stephen H. Montgomery, +5

Genome Biology and Evolution

Shaking the Diptera tree of life: performance analysis of nuclear and mitochondrial sequence data partitions

Jason Caravas, Markus Friedrich

Systematic Entomology

Comparative GenomicsGeneticsEntomologyGenomicsPhylogenetic Analysis +17

Comparative genome analysis reveals a complex population structure of Legionella pneumophila subspecies

Natalia A. Kozak‐Muiznieks, Shatavia S. Morrison, Jeffrey W. Mercante, +7

Infection Genetics and Evolution

Legionella Pneumophila SubspeciesComparative GenomicsGeneticsComplex Population StructurePathogen Characterization +6