Ada Y. Shaw

ProteinGym: Large-Scale Benchmarks for Protein Design and Fitness Prediction

Pascal Notin, Aaron W. Kollasch, Daniel P. Ritter et al. · 2023 · 186 citations · Full text

Inverse Folding, Engineering, Machine Learning +19

An in silico method to assess antibody fragment polyreactivity

Edward P. Harvey, Jung-Eun Shin, Meredith A. Skiba et al. · Nature Communications · 2022 · 55 citations · Full text

Protein design using structure-based residue preferences

David Ding, Ada Y. Shaw, Sam Sinai et al. · Nature Communications · 2024 · 35 citations · Full text

Machine learning prediction of enzyme optimum pH

Japheth E. Gado, Matthew W. Knotts, Ada Y. Shaw et al. · 2023 · 19 citations · Full text

Removing bias in sequence models of protein fitness

Ada Y. Shaw, Hansen Spinner, June Shin et al. · 2023 · 16 citations · Full text

Protein Fitness, Engineering, Machine Learning +15