H3K27me3 demethylases alter HSP22 and HSP17.6C expression in response to recurring heat in Arabidopsis

Nobutoshi Yamaguchi, Satoshi Matsubara, Kaori Yoshimizu, +14

Nature Communications

Molecular RegulationGeneticsMolecular BiologyMolecular GeneticsEpigenetics +19

RNA-Seq reveals virus–virus and virus–plant interactions in nature

Mari Kamitani, Atsushi J. Nagano, Mie N. Honjo, +1

FEMS Microbiology Ecology

Lasy-Seq: a high-throughput library preparation method for RNA-Seq and its application in the analysis of plant responses to fluctuating temperatures

Mari Kamitani, Makoto Kashima, Ayumi Tezuka, +1

Scientific Reports

Seasonality of interactions between a plant virus and its host during persistent infection in a natural environment

Mie N. Honjo, Naoko Emura, Tetsuhiro Kawagoe, +4

The ISME Journal

Natural EnvironmentEngineeringBotanyGeneticsPlant Pathology +16

Pepper vein yellows virus 9: a novel polerovirus isolated from chili pepper in Indonesia

Sota Koeda, Kanami Homma, Mari Kamitani, +4

Archives of Virology

Chili PepperPlant VirusPlant-virus InteractionVirologyPepper Vein +3

Fillable and unfillable gaps in plant transcriptome under field and controlled environments

Yoichi Hashida, Ayumi Tezuka, Yasuyuki Nomura, +4

Plant Cell & Environment

Unfillable GapsBotanyGeneticsRice Transcriptome DynamicsGenomics +16

A Survey on Plant Viruses in Natural Brassicaceae Communities Using RNA-Seq

Mari Kamitani, Atsushi J. Nagano, Mie N. Honjo, +1

Microbial Ecology

BiologyPlant VirusBotanyPlant-virus InteractionNatural Sciences +8

DeLTa-Seq: direct-lysate targeted RNA-Seq from crude tissue lysate

Makoto Kashima, Mari Kamitani, Yasuyuki Nomura, +4

Plant Methods

Broad distribution spectrum from Gaussian to power law appears in stochastic variations in RNA-seq data

Akinori Awazu, Takahiro Tanabe, Mari Kamitani, +2

Scientific Reports