Rahmatullah Roche

EquiPNAS: improved protein–nucleic acid binding site prediction using protein-language-model-informed equivariant deep graph neural networks

Rahmatullah Roche, Bernard Moussad, Md Hossain Shuvo et al. · Nucleic Acids Research · 2024 · 74 citations · Full text

Computing, Bioinformatics, Biology +12

The transformative power of transformers in protein structure prediction

Bernard Moussad, Rahmatullah Roche, Debswapna Bhattacharya · Proceedings of the National Academy of Sciences · 2023 · 35 citations · Full text

Life Sciences, Biochemistry, Bioinformatics +13

E(3) equivariant graph neural networks for robust and accurate protein-protein interaction site prediction

Rahmatullah Roche, Bernard Moussad, Md Hossain Shuvo et al. · PLoS Computational Biology · 2023 · 32 citations · Full text

Life Sciences, Bioinformatics, Biophysics +16

<scp>DisCovER</scp> : distance‐ and orientation‐based covariational threading for weakly homologous proteins

Sutanu Bhattacharya, Rahmatullah Roche, Bernard Moussad et al. · Proteins Structure Function and Bioinformatics · 2021 · 19 citations · Full text

Life Sciences, Bioinformatics, Biology +17

Hybridized distance- and contact-based hierarchical structure modeling for folding soluble and membrane proteins

Rahmatullah Roche, Sutanu Bhattacharya, Debswapna Bhattacharya · PLoS Computational Biology · 2021 · 10 citations · Full text

Life Sciences, Biochemistry, Biophysics +17