Spatio-Temporal Interdependence of Bacteria and Phytoplankton during a Baltic Sea Spring Bloom

Carina Bunse, Mireia Bertos‐Fortis, Ingrid Sassenhagen, +11

Frontiers in Microbiology

Physical barriers and environmental gradients cause spatial and temporal genetic differentiation of an extensive algal bloom

Anna Godhe, Conny Sjöqvist, Sirje Sildever, +16

Journal of Biogeography

EngineeringMarine SystemsOceanographyMarine GenomicsMolecular Ecology +19

Toxic HAB species from the Sea of Okhotsk detected by a metagenetic approach, seasonality and environmental drivers

Sirje Sildever, Yoko Kawakami, Nanako Kanno, +4

Harmful Algae

BiologyEnvironmental DriversEngineeringToxic Hab SpeciesMarine Pollution +7

EUKARYOME: the rRNA gene reference database for identification of all eukaryotes

Leho Tedersoo, Mahdieh S. Hosseyni Moghaddam, Vladimir Mikryukov, +18

Database

Development of an absolute quantification method for ribosomal RNA gene copy numbers per eukaryotic single cell by digital PCR

Kyoko Yarimizu, Sirje Sildever, Yoko Hamamoto, +7

Harmful Algae

Absolute Quantification MethodDigital PcrDna SequencingSystems BiologyMolecular Biological Method +12

Temperature optima of a natural diatom population increases as global warming proceeds

Giannina S. I. Hattich, Sami A. Jokinen, Sirje Sildever, +6

Nature Climate Change

Experimental EvolutionEngineeringGlobal Warming ProceedsMarine SystemsModern S. Marinoi +17

Monitoring of the toxic dinoflagellate Alexandrium catenella in Osaka Bay, Japan using a massively parallel sequencing (MPS)-based technique

Satoshi Nagai, Hungyen Chen, Yoko Kawakami, +10

Harmful Algae

BiologyParallel SequencingOsaka BayMicrobial EcologyToxicology +4

Comparing PCR-generated artifacts of different polymerases for improved accuracy of DNA metabarcoding

Satoshi Nagai, Sirje Sildever, Noriko Nishi, +4

Metabarcoding and Metagenomics

Influence of surface salinity gradient on dinoflagellate cyst community structure, abundance and morphology in the Baltic Sea, Kattegat and Skagerrak

Sirje Sildever, Thorbjørn Joest Andersen, Sofia Ribeiro, +1

Estuarine Coastal and Shelf Science

BiologyMarine GeologyEngineeringBloom EcologyBiological Oceanography +5

Plankton biodiversity and species co-occurrence based on environmental DNA – a multiple marker study

Sirje Sildever, Peeter Laas, Natalja Kolesova, +3

Metabarcoding and Metagenomics

EngineeringDna AnalysisMicrozooplankton SpeciesDna BarcodingPhylogenetics +16