Gydo C. P. van Zundert

Author

Also Known As

B.M. Hudson, G. C. P. van Zundert, G.C.P. van Zundert, Gydo C P van Zundert, Gydo C. P. van Zundert, Gydo C.P. van Zundert, Gydo C.P.van Zundert, Gydo Zundert, Gydo C.P. van Zundert, van Zundert, Gydo C. P.

Publications

4.4K

Citations

H-Index

Concepts

All Affiliations

Utrecht University Schrodinger (United States)Stanford University Centre National de la Recherche Scientifique University of California, San Francisco

About

Gydo C. P. van Zundert is an author at Utrecht University specializing in molecular biology, biophysics, and medicine.

Top Concepts

#	Concept	H-Index	Publications	Citations
1	Medicine	9	9	3.4K
2	Engineering	8	8	3.2K
3	Natural Sciences	4	4	204
4	Biochemistry	3	3	180
5	Biomolecular Engineering	2	2	112

Gydo C. P. van Zundert

Publications

3.9K

Citations

H-Index

Page 1

	Year	Citations
The HADDOCK2.2 Web Server: User-Friendly Integrative Modeling of Biomolecular Complexes Gydo C. P. van Zundert, João Rodrigues, Mikaël Trellet, Journal of Molecular Biology Haddock PortalEngineeringMedicineComputational BiologyRational Drug Design	2015	2.9K
Probing a cell-embedded megadalton protein complex by DNP-supported solid-state NMR Mohammed Kaplan, Abhishek Cukkemane, Gydo C. P. van Zundert, Nature Methods Dnp-supported Solid-state NmrBiomolecular AnalysisMolecular BiologyStructural BiologyProtein Nmr	2015	144
DisVis: quantifying and visualizing accessible interaction space of distance-restrained biomolecular complexes Gydo C. P. van Zundert, Alexandre M. J. J. Bonvin Bioinformatics	2015	79
<scp>qFit</scp> 3: Protein and ligand multiconformer modeling for X‐ray crystallographic and single‐particle <scp>cryo‐EM</scp> density maps Blake T. Riley, Stephanie A. Wankowicz, Saulo H. P. de Oliveira, Protein Science X-ray CrystallographyAlternate ConformationsStructural BioinformaticsBiomolecular Structure PredictionMolecular Biology	2020	74
Integrative Modeling of Biomolecular Complexes: HADDOCKing with Cryo-Electron Microscopy Data Gydo C. P. van Zundert, Adrien S. J. Melquiond, Alexandre M. J. J. Bonvin Structure Integrative ModelingProtein FoldingMedicineMolecular BiologyStructural Biology	2015	72
GemSpot: A Pipeline for Robust Modeling of Ligands into Cryo-EM Maps Michael J. Robertson, Gydo C. P. van Zundert, Kenneth Borrelli, Structure Cryo-em MapsBiophysical ModelingEngineeringRobust ModelingMedicine	2020	72
Defining the limits of homology modeling in information‐driven protein docking João Rodrigues, Adrien S. J. Melquiond, Ezgi Karaca, Proteins Structure Function and Bioinformatics Protein UniverseEngineeringInteractomicsProtein FoldingMedicine	2013	67
<i>qFit-ligand</i> Reveals Widespread Conformational Heterogeneity of Drug-Like Molecules in X-Ray Electron Density Maps Gydo C. P. van Zundert, Brandi M. Hudson, Saulo H. P. de Oliveira, Journal of Medicinal Chemistry	2018	67
Macromolecular refinement of X-ray and cryoelectron microscopy structures with Phenix/OPLS3e for improved structure and ligand quality Gydo C. P. van Zundert, Nigel W. Moriarty, Oleg V. Sobolev, Structure X-ray CrystallographyCrystal StructureCryoelectron Microscopy StructuresEngineeringMicroscopy	2021	64
Fast and sensitive rigid-body fitting into cryo-EM density maps with PowerFit Gydo C. P. van Zundert, Alexandre M. J. J. Bonvin AIMS Biophysics Cryo-em Density MapsEngineeringStructural BioinformaticsMolecular BiologySensitive Rigid-body	2015	62

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